RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CHST8Q9H2A9 424 aa14.09□□□□□ -0.15
HMGN1-208ENST00000443046 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
HMGN1-208ENST00000443046 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
HMGN1-208ENST00000443046 ASF1BQ9NVP2 202 aa14.09□□□□□ -0.15
HMGN1-208ENST00000443046 C5AR2Q9P296 337 aa14.09□□□□□ -0.15
HMGN1-208ENST00000443046 SETD2Q9BYW2 2564 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-208ENST00000443046 PIKFYVEQ9Y2I7 2098 aa14.08□□□□□ -0.15
HMGN1-208ENST00000443046 TLCD2A6NGC4 264 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ZNF185O15231 689 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 MTX2O75431 263 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 CDK14O94921 469 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 MYBL1P10243 752 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 RORAP35398 523 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 PIGHQ14442 188 aaPredicted RBP14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ALS2CLQ60I27 953 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 DSELQ8IZU8 1212 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ZBTB2Q8N680 514 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ENDOVQ8N8Q3 282 aaKnown RBP14.08□□□□□ -0.16
HMGN1-208ENST00000443046 TTC13Q8NBP0 860 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 VPS35Q96QK1 796 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 NLNQ9BYT8 704 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 HSD3B7Q9H2F3 369 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 HAUS4Q9H6D7 363 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 MAGEE1Q9HCI5 957 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 RAD18Q9NS91 495 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 KCND1Q9NSA2 647 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 HAUS2Q9NVX0 235 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 GPR83Q9NYM4 423 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 TCFL5Q9UL49 500 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 TTLL3Q9Y4R7 772 aa14.08□□□□□ -0.16
HMGN1-208ENST00000443046 MEN1O00255 615 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 KCNJ13O60928 360 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 PRKCIP41743 596 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CD86P42081 329 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 VAV2P52735 878 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 GSDMDP57764 484 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 DMPKQ09013 629 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 GPR19Q15760 415 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CCDC183Q5T5S1 534 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 FAM69BQ5VUD6 431 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 E4F1Q66K89 784 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-208ENST00000443046 KLHL35Q6PF15 583 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 TMEM126BQ8IUX1 230 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
HMGN1-208ENST00000443046 IQCKQ8N0W5 287 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CARFQ8N187 725 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CNTD1Q8N815 330 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 TRIM11Q96F44 468 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 AIPL1Q9NZN9 384 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 MYO1AQ9UBC5 1043 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 TRIM10Q9UDY6 481 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 SNX7Q9UNH6 387 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 HIVEP1P15822 2718 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 CROCCQ5TZA2 2017 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 F8P00451 2351 aa14.07□□□□□ -0.16
HMGN1-208ENST00000443046 NF1P21359 2839 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 OR5K3A6NET4 321 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 ANKUB1A6NFN9 424 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 ZBTB11O95625 1053 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 KLK3P07288 261 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 BPIP17213 487 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 TMEM115Q12893 351 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 SLC10A2Q12908 348 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 DPYSL3Q14195 570 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 GALNT3Q14435 633 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 RPE65Q16518 533 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 DNTTIP2Q5QJE6 756 aaKnown RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 IGFL3Q6UXB1 125 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 ANKRD20A12PQ8NF67 263 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 LRRN4Q8WUT4 740 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 XPO4Q9C0E2 1151 aaKnown RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 MAP10Q9P2G4 905 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 G3BP2Q9UN86 482 aaKnown RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 SHOC2Q9UQ13 582 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 B3GNT3Q9Y2A9 372 aa14.06□□□□□ -0.16
HMGN1-208ENST00000443046 MDC1Q14676 2089 aaKnown RBP14.06□□□□□ -0.16
HMGN1-208ENST00000443046 UBA6A0AVT1 1052 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-208ENST00000443046 A6NL46 340 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 PRF1P14222 555 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 VCLP18206 1134 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 HALP42357 657 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 ARL4DP49703 201 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 RRADP55042 308 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 KRT81Q14533 505 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 ZNF789Q5FWF6 425 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 VWA5B1Q5TIE3 1220 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 PRAMEF17Q5VTA0 474 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 FAM198BQ6UWH4 519 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 CISD2Q8N5K1 135 aaKnown RBP14.05□□□□□ -0.16
HMGN1-208ENST00000443046 DTX3LQ8TDB6 740 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 CPT1BQ92523 772 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 INPP5DQ92835 1189 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms