RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MUSKO15146 869 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ENO1P06733 434 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITGA2BP08514 1039 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PDHA1P08559 390 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITGALP20701 1170 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SAT1P21673 171 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 GRK6P43250 576 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC12A2P55011 1212 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SESN2P58004 480 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC10A7Q0GE19 358 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF528Q3MIS6 628 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSTD2Q5T7W7 516 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 MROH9Q5TGP6 573 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ATG16L1Q676U5 607 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CRTC1Q6UUV9 634 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 Q6ZSR6 202 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 GALNT13Q8IUC8 556 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 RIN3Q8TB24 985 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CEP44Q9C0F1 390 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CASS4Q9NQ75 786 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF358Q9NW07 568 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 KCTD5Q9NXV2 234 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CA5BQ9Y2D0 317 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 COQ6Q9Y2Z9 468 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 LAMA3Q16787 3333 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 IGHV1OR15-9A0A0B4J2B8 117 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 WNT9AO14904 365 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF189O75820 626 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 HNRNPLP14866 589 aaKnown RBP eCLIP7.31□□□□□ -1.246e-7■■■■□ 24.4
CDC42BPA-208ENST00000442054 NUDT1P36639 197 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 KIR2DL1P43626 348 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC1A6P48664 564 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CSE1LP55060 971 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SCAPQ12770 1279 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 OLIG2Q13516 323 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 RFTN1Q14699 578 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SMAD1Q15797 465 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 UGP2Q16851 508 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PHF19Q5T6S3 580 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 N4BP2L1Q5TBK1 243 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CRTC3Q6UUV7 619 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 USP30Q70CQ3 517 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ADIPOR2Q86V24 386 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRIM42Q8IWZ5 723 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF567Q8N184 647 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPDYE1Q8NFV5 336 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 HTR3CQ8WXA8 447 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 MAELQ96JY0 434 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPP1R2P1Q96PQ5 205 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC38A3Q99624 504 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CDC6Q99741 560 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 FICDQ9BVA6 458 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 FSCN3Q9NQT6 498 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SYBUQ9NX95 663 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPARGC1AQ9UBK2 798 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 MIA3Q5JRA6 1907 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DOCK8Q8NF50 2099 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GRID2O43424 1007 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DFNA5O60443 496 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CRTAMO95727 393 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 JMJD7P0C870 316 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PGAM1P18669 254 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GABRB3P28472 473 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CRADDP78560 199 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC25A3Q00325 362 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DSC2Q02487 901 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 TCF15Q12870 199 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SERINC3Q13530 473 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GALNT3Q14435 633 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ELOCQ15369 112 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CSRP2Q16527 193 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DNAL1Q4LDG9 190 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 INO80DQ53TQ3 878 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 KIAA1161Q6NSJ0 714 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC30A9Q6PML9 568 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CHST15Q7LFX5 561 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GLT6D1Q7Z4J2 308 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GKN2Q86XP6 184 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 NUDCD3Q8IVD9 361 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSNARE1Q96NA8 513 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ABCG8Q9H221 673 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM83DQ9H4H8 585 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 BPIFA1Q9NP55 256 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DLGAP2Q9P1A6 1054 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 EBF1Q9UH73 591 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RIMS3Q9UJD0 308 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 POMPQ9Y244 141 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCDHB11Q9Y5F2 797 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PLXNA4Q9HCM2 1894 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 TTC24A2A3L6 582 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 MAGEA13PA6NCF6 341 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 TLR4O00206 839 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PSMD3O43242 534 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DENRO43583 198 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms