RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PACSIN1Q9BY11 444 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 RAB17Q9H0T7 212 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 STN1Q9H668 368 aaKnown RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 UCK1Q9HA47 277 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 RNPEPL1Q9HAU8 725 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 ASH1LQ9NR48 2969 aaKnown RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 RPL26L1Q9UNX3 145 aaKnown RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 SLC17A4Q9Y2C5 497 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 RNF215Q9Y6U7 377 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PRAMEF33A0A0G2JMD5 474 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 GPR89AB7ZAQ6 455 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 TRAFD1O14545 582 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PRAMEF10O60809 474 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PCCBP05166 539 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 CYP1A2P05177 515 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 GPR89BP0CG08 455 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 MYF5P13349 255 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 CALB2P22676 271 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 FASLGP48023 281 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 CLCNKAP51800 687 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PLOD1Q02809 727 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PPP2R5EQ16537 467 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 DCUN1D2Q6PH85 259 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 WDR74Q6RFH5 385 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 EXOC3L1Q86VI1 746 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 OR6K2Q8NGY2 324 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 ZDHHC1Q8WTX9 485 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 UBLCP1Q8WVY7 318 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 ZFPM2Q8WW38 1151 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 OR1E3Q8WZA6 343 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 USP7Q93009 1102 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 SEMA4CQ9C0C4 833 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 SYNDIG1Q9H7V2 258 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 SP110Q9HB58 689 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 RCOR3Q9P2K3 495 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 PNMA8BQ9ULN7 279 aaPredicted RBP5.97□□□□□ -1.45
PTPRR-204ENST00000440835 TMCO1Q9UM00 188 aa5.97□□□□□ -1.45
PTPRR-204ENST00000440835 A0A1W2PRQ8 180 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 OR5K4A6NMS3 321 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 TOX3O15405 576 aaPredicted RBP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SNX3O60493 162 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 GKP32189 559 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SERPINB6P35237 376 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SLC1A1P43005 524 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CCR10P46092 362 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 ABHD18Q0P651 414 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CNPY1Q3B7I2 92 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KRT71Q3SY84 523 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SEL1L2Q5TEA6 688 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 PLEKHA7Q6IQ23 1121 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 TMEM71Q6P5X7 295 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CEACAM20Q6UY09 585 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 USP45Q70EL2 814 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 B3GNT8Q7Z7M8 397 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KLHL7Q8IXQ5 586 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 MCOLN2Q8IZK6 566 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KIAA1143Q96AT1 154 aaPredicted RBP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 DTD2Q96FN9 168 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SLC45A3Q96JT2 553 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 MCCC1Q96RQ3 725 aaPredicted RBP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SLC39A3Q9BRY0 314 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 NUP85Q9BW27 656 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 THAP2Q9H0W7 228 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 FBXO8Q9NRD0 319 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 RAD18Q9NS91 495 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SAMD15Q9P1V8 674 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SIRPGQ9P1W8 387 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 RABGEF1Q9UJ41 708 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 AP4E1Q9UPM8 1137 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KIF26BQ2KJY2 2108 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 GOLGA6L10A0A0M3HER8 536 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CLEC18AA5D8T8 446 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 C9orf172C9J069 976 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 H3BRJ5 948 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 INSIG1O15503 277 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 HNRNPRO43390 633 aaKnown RBP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SPOPO43791 374 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 PIGNO95427 931 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 FTCDO95954 541 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 FGF1P05230 155 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 THRAP10827 490 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CSTF2P33240 577 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CASP2P42575 452 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 SERPINB4P48594 390 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 PTDSS1P48651 473 aaKnown RBP5.96□□□□□ -1.46
PTPRR-204ENST00000440835 KCNAB2Q13303 367 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 BOLA3Q53S33 107 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 DCAF12Q5T6F0 453 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 IRGCQ6NXR0 463 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CLEC18BQ6UXF7 455 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 RFX8Q6ZV50 586 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 PRICKLE2Q7Z3G6 844 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 PEX5LQ8IYB4 626 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 FITM2Q8N6M3 262 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 CLEC18CQ8NCF0 446 aa5.96□□□□□ -1.46
PTPRR-204ENST00000440835 FBF1Q8TES7 1133 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms