RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ZNF382Q96SR6 550 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 ACOX2Q99424 681 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 TLR8Q9NR97 1041 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 SUN2Q9UH99 717 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 ACTL7AQ9Y615 435 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 H3BMQ9 156 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 SNAP29O95721 258 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 TIMP1P01033 207 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 GALTP07902 379 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 CSF2RAP15509 400 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 TAF10Q12962 218 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 RAB39AQ14964 217 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 C5orf22Q49AR2 442 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 PYCR3Q53H96 274 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 C6orf136Q5SQH8 315 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 FAM171A1Q5VUB5 890 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 SCIMPQ6UWF3 145 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 PRR23BQ6ZRT6 265 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 GLT6D1Q7Z4J2 308 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 TMEM173Q86WV6 379 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 RIMKLAQ8IXN7 391 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 ATAD1Q8NBU5 361 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 MAGEE2Q8TD90 523 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 COG8Q96MW5 612 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 LRRC3Q9BY71 257 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 SEPT3Q9UH03 358 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 FAF1Q9UNN5 650 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 VPS9D1Q9Y2B5 631 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 ASB1Q9Y576 335 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 A0A0D9SEW6 157 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 TRIM64BA6NI03 449 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 H0YAE9 185 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 E2F3O00716 465 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 VPS26AO75436 327 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 ATE1O95260 518 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 CDH1P12830 882 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 PKMP14618 531 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 CES1P23141 567 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 CASP2P42575 452 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 RGRP47804 291 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 ENTPD1P49961 510 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 HLCSP50747 726 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 OR4D2P58180 307 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 CRY1Q16526 586 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 VARS2Q5ST30 1063 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 HID1Q8IV36 788 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 LEMD2Q8NC56 503 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 PROKR1Q8TCW9 393 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 PSKH2Q96QS6 385 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 CHID1Q9BWS9 393 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 MAGEH1Q9H213 219 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 HEBP1Q9NRV9 189 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 EIF2B4Q9UI10 523 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 MAGEL2Q9UJ55 1249 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 PCDHB3Q9Y5E6 796 aa16.19■□□□□ 0.18
CLCNKA-203ENST00000439316 SYN3O14994 580 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SYNCRIPO60506 623 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 OR4F21O95013 312 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CDKN1CP49918 316 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 GNA12Q03113 381 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PRKG2Q13237 762 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 MTA1Q13330 715 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CTSL3PQ5NE16 218 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CCNYL2Q5T2Q4 361 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SLC2A7Q6PXP3 512 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TBPL2Q6SJ96 375 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TMCO2Q7Z6W1 182 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 GPSM1Q86YR5 675 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 LGI2Q8N0V4 545 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 FNDC5Q8NAU1 212 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 OR7D4Q8NG98 312 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CD200R1Q8TD46 325 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 HSPBAP1Q96EW2 488 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 VPS50Q96JG6 964 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 NSMCE2Q96MF7 247 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 DCUN1D5Q9BTE7 237 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 BDH2Q9BUT1 245 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CINPQ9BW66 212 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SOX17Q9H6I2 414 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 IRAK4Q9NWZ3 460 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PKD2L2Q9NZM6 624 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TRMT6Q9UJA5 497 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 ST14Q9Y5Y6 855 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 GREB1Q4ZG55 1949 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SH3PXD2BA1X283 911 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 C2orf81A6NN90 581 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 F5H5T6 163 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 H0Y858 1186 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 GIPC1O14908 333 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 NIPSNAP2O75323 286 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PRLP01236 227 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 MT-ND1P03886 318 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms