RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SELENOMQ8WWX9 145 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 RBBP8Q99708 897 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A7Q9HAW7 530 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A10Q9HAW8 530 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A8Q9HAW9 530 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 THAP1Q9NVV9 213 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 DRGXA6NNA5 263 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 K7ERQ8 282 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 GLDCP23378 1020 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 CCNFP41002 786 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 TRAF2Q12933 501 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-207ENST00000429896 CATSPER1Q8NEC5 780 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 ARHGEF3Q9NR81 526 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 SLC6A11P48066 632 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 ACSM2AQ08AH3 577 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 ACSM2BQ68CK6 577 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 PIGKQ92643 395 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 HIC2Q96JB3 615 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 PHACTR1Q9C0D0 580 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 PCDH12Q9NPG4 1184 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 OSER1Q9NX31 292 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 RHBDL2Q9NX52 303 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 SH3BP4Q9P0V3 963 aa12.77□□□□□ -0.36
PTCH1-207ENST00000429896 OTCP00480 354 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CMPK1P30085 196 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 HNRNPH1P31943 449 aaKnown RBP12.77□□□□□ -0.37
PTCH1-207ENST00000429896 GJA4P35212 333 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 AQP5P55064 265 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 NFYCQ13952 458 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 AVL9Q8NBF6 648 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CDH3P22223 829 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 KRT20P35900 424 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CXCL12P48061 93 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 RALGDSQ12967 914 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 HLA-DQA1Q5Y7H0 255 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CATSPER2Q96P56 530 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 ACAT2Q9BWD1 397 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 XPR1Q9UBH6 696 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 SNX13Q9Y5W8 968 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 GMFGO60234 142 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 APBB3O95704 486 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 NRLP54845 237 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 DNAL1Q4LDG9 190 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 TYW3Q6IPR3 259 aaKnown RBP12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CMC1Q7Z7K0 106 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 FNDC5Q8NAU1 212 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 SLC44A1Q8WWI5 657 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CDKN2AIPNLQ96HQ2 116 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 DPY30Q9C005 99 aa12.77□□□□□ -0.37
PTCH1-207ENST00000429896 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SRCP12931 536 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ZNF234Q14588 700 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 IRGCQ6NXR0 463 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 C2orf73Q8N5S3 287 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 FAM83CQ9BQN1 747 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 IQCMA0A1B0GVH7 501 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 FAM47E-STBD1D6RA91 191 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 UBDO15205 165 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 LINC01565O15544 149 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 NUDT17P0C025 328 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ATP1B2P14415 290 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 NDUFS1P28331 727 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 HNF1BP35680 557 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 OASLQ15646 514 aaKnown RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 MLF2Q15773 248 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 KIAA1161Q6NSJ0 714 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 RAB11FIP5Q9BXF6 653 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 CCL26Q9Y258 94 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 KLHL18O94889 574 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 EPOP01588 193 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 CD72P21854 359 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ITGB8P26012 769 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SLC1A2P43004 574 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SLC36A4Q6YBV0 504 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 TNIP2Q8NFZ5 429 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SETD7Q8WTS6 366 aaKnown RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 NDEL1Q9GZM8 345 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 C8GP07360 202 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ZNF252P-AS1Q0IIN9 211 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 PRKG2Q13237 762 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 NCEH1Q6PIU2 408 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 SLCO2A1Q92959 643 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 IMP4Q96G21 291 aaKnown RBP12.76□□□□□ -0.37
PTCH1-207ENST00000429896 HEY2Q9UBP5 337 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 MID1O15344 667 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 TMEM63AO94886 807 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 ITPKAP23677 461 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 HPCAL1P37235 193 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 LIMK2P53671 638 aa12.76□□□□□ -0.37
PTCH1-207ENST00000429896 KCNJ11Q14654 390 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms