RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 BIRC8Q96P09 236 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 CGREF1Q99674 301 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 LHPPQ9H008 270 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 PTBP2Q9UKA9 531 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TTC3P53804 2025 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 DFNA5O60443 496 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 NDUFS2O75306 463 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 CNMDO75829 334 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 KRT75O95678 551 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 NEK2P51955 445 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 MLLT6P55198 1093 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TAF10Q12962 218 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 MOGQ16653 247 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 ZCCHC8Q6NZY4 707 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 OR8H2Q8N162 312 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SACM1LQ9NTJ5 587 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 IMPAD1Q9NX62 359 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TPRKBQ9Y3C4 175 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SIPA1L1O43166 1804 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 ELOVL7A1L3X0 281 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 F8W810 466 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 FZD9O00144 591 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 RAD51BO15315 384 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 GPR32O75388 356 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 RAP2AP10114 183 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 KCNE1P15382 129 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 AGXTP21549 392 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 MATN1P21941 496 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 VARSP26640 1264 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 UBE3AQ05086 875 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TRIM32Q13049 653 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TAF1CQ15572 869 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 CRY1Q16526 586 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TMEM236Q5W0B7 351 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 FBXL22Q6P050 247 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 ZNF773Q6PK81 442 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 CYP20A1Q6UW02 462 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 CARNMT1Q8N4J0 409 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 MCFD2Q8NI22 146 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SGCDQ92629 289 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SLC30A3Q99726 388 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SEZ6LQ9BYH1 1024 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 WDR70Q9NW82 654 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SCHIP1Q9P0W5 487 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 TMA7Q9Y2S6 64 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 SAMHD1Q9Y3Z3 626 aaKnown RBP13.59□□□□□ -0.23
SGMS1-203ENST00000429490 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
SGMS1-203ENST00000429490 GPR39O43194 453 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 TBX1O43435 398 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.23
SGMS1-203ENST00000429490 HIST1H2AGP0C0S8 130 aaPredicted RBP13.58□□□□□ -0.23
SGMS1-203ENST00000429490 HIST1H2ADP20671 130 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 HALP42357 657 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 ALDH3B2P48448 385 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 CDKN1CP49918 316 aaPredicted RBP13.58□□□□□ -0.23
SGMS1-203ENST00000429490 CASP9P55211 416 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 ERVK-8P63133 956 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 C18orf21Q32NC0 220 aaPredicted RBP13.58□□□□□ -0.23
SGMS1-203ENST00000429490 DENND5AQ6IQ26 1287 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 BLOC1S3Q6QNY0 202 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.23
SGMS1-203ENST00000429490 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 SELENOMQ8WWX9 145 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 HIST1H2AHQ96KK5 128 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 TEX37Q96LM6 180 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 IL12RB2Q99665 862 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 HIST1H2AJQ99878 128 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 MYOCQ99972 504 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 H2AFJQ9BTM1 129 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 AGPAT4Q9NRZ5 378 aa13.58□□□□□ -0.23
SGMS1-203ENST00000429490 MCM3APO60318 1980 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 BTBD19C9JJ37 291 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 UMPSP11172 480 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 POLR2IP36954 125 aaKnown RBP13.58□□□□□ -0.24
SGMS1-203ENST00000429490 HSPA14Q0VDF9 509 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 SCAPQ12770 1279 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 C6orf136Q5SQH8 315 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 GALNT10Q86SR1 603 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 CLDN19Q8N6F1 224 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 SH3GL1Q99961 368 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 MICAL3Q7RTP6 2002 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
SGMS1-203ENST00000429490 SERPINA1P01009 418 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 IGFBP5P24593 272 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 HTR6P50406 440 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 RHOAP61586 193 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 FPGSQ05932 587 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 TRAF3Q13114 568 aa13.58□□□□□ -0.24
SGMS1-203ENST00000429490 INTS11Q5TA45 600 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms