RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SLC12A4Q9UP95 1085 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 FADS3Q9Y5Q0 445 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 H0Y858 1186 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 GRID2O43424 1007 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 ADAM23O75077 832 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 GUCA1CO95843 209 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 CTSCP53634 463 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 TAS2R38P59533 333 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 NFKB2Q00653 900 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 CCDC15Q0P6D6 951 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 TGFBIQ15582 683 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 SBSNQ6UWP8 590 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 HDDC3Q8N4P3 179 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 DLG3Q92796 817 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 L3HYPDHQ96EM0 354 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 HDAC8Q9BY41 377 aa17.1■□□□□ 0.33
FN1-208ENST00000426059 A0A1B0GTL3 188 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CCDC189A1A4V9 331 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 PRR23AA6NEV1 266 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 TMEM202A6NGA9 273 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 MATN2O00339 956 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 COL9A1P20849 921 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 DGKAP23743 735 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 COPAP53621 1224 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CORO7P57737 925 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 FAM46CQ5VWP2 391 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 RAET1GQ6H3X3 334 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 RASGEF1AQ8N9B8 481 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 DDHD1Q8NEL9 900 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 OR52B2Q96RD2 323 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 LATS2Q9NRM7 1088 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 COL6A3P12111 3177 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 SYCE1LA8MT33 242 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 PSMD11O00231 422 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 PCDH8O95206 1070 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 ALOX15P16050 662 aaPredicted RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 EPHA3P29320 983 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 NTSR1P30989 418 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 RGS4P49798 205 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CREB5Q02930 508 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 UBAP2LQ14157 1087 aaKnown RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 PHKG1Q16816 387 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CLEC6AQ6EIG7 209 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 EPGNQ6UW88 154 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 CYHR1Q6ZMK1 362 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 FRA10AC1Q70Z53 315 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 PLA2G15Q8NCC3 412 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 TRPC4APQ8TEL6 797 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 SKA2Q8WVK7 121 aaPredicted RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 PDLIM5Q96HC4 596 aaKnown RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 PANX3Q96QZ0 392 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 CNOT6Q9ULM6 557 aaKnown RBP17.09■□□□□ 0.33
FN1-208ENST00000426059 COL4A2P08572 1712 aa17.09■□□□□ 0.33
FN1-208ENST00000426059 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 IGLON5A6NGN9 336 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 RNASEH1O60930 286 aaKnown RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 T-ENOLP0DO92 83 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 AOAHP28039 575 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 TMEM115Q12893 351 aaPredicted RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 TMEM52BQ4KMG9 183 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 SEL1L3Q68CR1 1132 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 RAB44Q7Z6P3 723 aaPredicted RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 NRSN1Q8IZ57 195 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 LILRA3Q8N6C8 439 aaPredicted RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 RAD18Q9NS91 495 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 DNAJC28Q9NX36 388 aa17.08■□□□□ 0.33
FN1-208ENST00000426059 NFKBIL1Q9UBC1 381 aaPredicted RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 APOBEC2Q9Y235 224 aaKnown RBP17.08■□□□□ 0.33
FN1-208ENST00000426059 KRT87PA6NCN2 255 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 E9PBE3 544 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 HDAC3O15379 428 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 KLHL41O60662 606 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 SNX2O60749 519 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 GPR1P46091 355 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 RPS14P62263 151 aaKnown RBP17.08■□□□□ 0.32
FN1-208ENST00000426059 SH3BP2P78314 561 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 MBOAT1Q6ZNC8 495 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 GANCQ8TET4 914 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 KLK6Q92876 244 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.32
FN1-208ENST00000426059 CFAP99D6REC4 459 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 MAGEC1O60732 1142 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 NCALDP61601 193 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 PPP1R3AQ16821 1122 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 ELMO1Q92556 727 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 VPS35Q96QK1 796 aa17.07■□□□□ 0.32
FN1-208ENST00000426059 EIF2B4Q9UI10 523 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms