RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 MSX2P35548 267 aaPredicted RBP20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PPIGQ13427 754 aaKnown RBP eCLIP20.18■□□□□ 0.82
AP1S3-205ENST00000415298 TMEM270Q6UE05 265 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 CD300LGQ6UXG3 332 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 ADCK1Q86TW2 530 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 KIF18BQ86Y91 864 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SYTL1Q8IYJ3 562 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SVOPQ8N4V2 548 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 ZNF680Q8NEM1 530 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 OR4M1Q8NGD0 313 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 DCAKDQ8WVC6 231 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PPP1R2P1Q96PQ5 205 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 MECRQ9BV79 373 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SLC6A15Q9H2J7 730 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 CISHQ9NSE2 258 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 HNRNPCL2B2RXH8 293 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 NT5C1B-RDH14C9J2C7 533 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 ACOT8O14734 319 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 TBX1O43435 398 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 GMDSO60547 372 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 GLDCP23378 1020 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 NUBP1P53384 320 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 DSC1Q08554 894 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 XAF1Q6GPH4 301 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 FAM180BQ6P0A1 224 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 TMEM81Q6P7N7 255 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 XKRXQ6PP77 449 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 SLC47A2Q86VL8 602 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 LRRC52Q8N7C0 313 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 URGCPQ8TCY9 931 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 BCL2L14Q9BZR8 327 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 PRG3Q9Y2Y8 225 aaPredicted RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 TIMM13Q9Y5L4 95 aaPredicted RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 SEC24AO95486 1093 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 APOA1P02647 267 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 TYK2P29597 1187 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 IL12RB1P42701 662 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 BRCC3P46736 316 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 OR1G1P47890 313 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 TAF6P49848 677 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 CATSPEREQ5SY80 951 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 ZBTB37Q5TC79 503 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 BROXQ5VW32 411 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 KCNT2Q6UVM3 1135 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 SH2D5Q6ZV89 423 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 CREB3L2Q70SY1 520 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 CHST15Q7LFX5 561 aaPredicted RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 ZSWIM9Q86XI8 627 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 RASGRP3Q8IV61 690 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 FAM71AQ8IYT1 594 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 ANKFN1Q8N957 763 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 GOT1L1Q8NHS2 421 aaPredicted RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 LRRC39Q96DD0 335 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 BDH2Q9BUT1 245 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 RC3H2Q9HBD1 1191 aaKnown RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 GMPR2Q9P2T1 348 aaKnown RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 REV1Q9UBZ9 1251 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 WARS2Q9UGM6 360 aaKnown RBP20.17■□□□□ 0.82
AP1S3-205ENST00000415298 FBXO5Q9UKT4 447 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 NME7Q9Y5B8 376 aa20.17■□□□□ 0.82
AP1S3-205ENST00000415298 PTPRSQ13332 1948 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 E7ENX8 843 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 M0R3G1 203 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SOCS2O14508 198 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 PFKMP08237 780 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 RALBP11234 206 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 RAB3AP20336 220 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 HMGCLP35914 325 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 CEACAM7Q14002 265 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SOWAHAQ2M3V2 549 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 BEND4Q6ZU67 534 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 CHSY3Q70JA7 882 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 MRPL45Q9BRJ2 306 aaKnown RBP20.16■□□□□ 0.82
AP1S3-205ENST00000415298 BCO2Q9BYV7 579 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 ROGDIQ9GZN7 287 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SNX15Q9NRS6 342 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 IFT80Q9P2H3 777 aaPredicted RBP20.16■□□□□ 0.82
AP1S3-205ENST00000415298 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SLC22A2O15244 555 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 JUNP05412 331 aaKnown RBP20.16■□□□□ 0.82
AP1S3-205ENST00000415298 RFX1P22670 979 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 NUDT2P50583 147 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 CTF1Q16619 201 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 TYW3Q6IPR3 259 aaKnown RBP20.16■□□□□ 0.82
AP1S3-205ENST00000415298 RNF135Q8IUD6 432 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 UBR7Q8N806 425 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 KYQ8NBH2 561 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 OR6P1Q8NGX9 317 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 PTP4A1Q93096 173 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 ZHX1-C8orf76Q96EF9 292 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 PDXPQ96GD0 296 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SERAC1Q96JX3 654 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SYT11Q9BT88 431 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 C20orf27Q9GZN8 174 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 DSN1Q9H410 356 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 TMPRSS11EQ9UL52 423 aa20.16■□□□□ 0.82
AP1S3-205ENST00000415298 SYNCRIPO60506 623 aaKnown RBP20.15■□□□□ 0.82
AP1S3-205ENST00000415298 AMHP03971 560 aa20.15■□□□□ 0.82
AP1S3-205ENST00000415298 TCN1P20061 433 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms