RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 BCL7AQ4VC05 210 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TMEM31Q5JXX7 168 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 LIPMQ5VYY2 423 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 CES4AQ5XG92 561 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ATG16L1Q676U5 607 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3GQ6DHY5 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3CQ6IPX1 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ANO7Q6IWH7 933 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 PNCKQ6P2M8 343 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 NEK5Q6P3R8 708 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ZCCHC23Q6ZST2 131 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 FAM47EQ6ZV65 393 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 OTOAQ7RTW8 1153 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 PIWIL4Q7Z3Z4 852 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 ADGRG6Q86SQ4 1221 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ISCA2Q86U28 154 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TRIM69Q86WT6 500 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3Q8IZP1 549 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 BEND7Q8N7W2 519 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 TSTD1Q8NFU3 115 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 PJA1Q8NG27 643 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 OR2T34Q8NGX1 318 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 OR6Y1Q8NGX8 325 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 PPP1R14CQ8TAE6 165 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 EEF1AKMT1Q8WVE0 214 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 INPP5DQ92835 1189 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 KIAA1191Q96A73 305 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SGF29Q96ES7 293 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 PDLIM5Q96HC4 596 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 HIC2Q96JB3 615 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 LENG8Q96PV6 779 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 HHIPQ96QV1 700 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ATOH8Q96SQ7 321 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 NELL2Q99435 816 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 C1QTNF7Q9BXJ2 289 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TEX101Q9BY14 249 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SLC17A9Q9BYT1 436 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 FAM107BQ9H098 131 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 BTBD1Q9H0C5 482 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 NSRP1Q9H0G5 558 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 RABEP2Q9H5N1 569 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TFB2MQ9H5Q4 396 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 WDR26Q9H7D7 661 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SGK2Q9HBY8 427 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SLCO1B3Q9NPD5 702 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ITM2CQ9NQX7 267 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 MBNL1Q9NR56 388 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 LATS2Q9NRM7 1088 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 OXSMQ9NWU1 459 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 KLHL42Q9P2K6 505 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 EBF1Q9UH73 591 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 MUTYHQ9UIF7 546 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ATG2BQ96BY7 2078 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 NEMP2A6NFY4 417 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TMEM202A6NGA9 273 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TMEM114B3SHH9 223 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CDC7O00311 574 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 NDUFAB1O14561 156 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 KPNA5O15131 536 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 VEGFDO43915 354 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 NUAK1O60285 661 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 DLX3O60479 287 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TRIM13O60858 407 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 LILRB5O75023 590 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CDK14O94921 469 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 SEMA4FO95754 770 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 PAK4O96013 591 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 CBSLP0DN79 551 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 ENO3P13929 434 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 MTHFD2P13995 350 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ZNF8P17098 575 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 DGKAP23743 735 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ATP5F1P24539 256 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 GRK2P25098 689 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 MAT2AP31153 395 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 CBSP35520 551 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TRIM23P36406 574 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 RPS9P46781 194 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 KCNC1P48547 511 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 PRKAA2P54646 552 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 DNAJB13P59910 316 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 OCRLQ01968 901 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 SGCGQ13326 291 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 GTF2H3Q13889 308 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 INPP5AQ14642 412 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 TSNQ15631 228 aaKnown RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 PPP1R3AQ16821 1122 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ZNF658BQ4V348 819 aaPredicted RBP6.54□□□□□ -1.36
VPS41-204ENST00000413141 ACSBG2Q5FVE4 666 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 PLEKHS1Q5SXH7 462 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 CGB2Q6NT52 195 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 SBSNQ6UWP8 590 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 NAPRTQ6XQN6 538 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 ADAMTSL2Q86TH1 951 aa6.54□□□□□ -1.36
VPS41-204ENST00000413141 MYO1HQ8N1T3 1032 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms