RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 NFKBIL1Q9UBC1 381 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 SERGEFQ9UGK8 458 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 LNPEPQ9UIQ6 1025 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 GNPTGQ9UJJ9 305 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 PTBP2Q9UKA9 531 aaKnown RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 PCTPQ9UKL6 214 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 SLC8A2Q9UPR5 921 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 APOBEC2Q9Y235 224 aaKnown RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 FIS1Q9Y3D6 152 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 PCYT1BQ9Y5K3 369 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 FADS3Q9Y5Q0 445 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 PTGDR2Q9Y5Y4 395 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 ST14Q9Y5Y6 855 aa8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 PRRC2BQ5JSZ5 2229 aaKnown RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 MUC22E2RYF6 1773 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P34-201ENST00000413023 KIF26AQ9ULI4 1882 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 KRT87PA6NCN2 255 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 B2RBV5 119 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 H3BQ06 376 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 STX16-NPEPL1H3BU86 382 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 E2F3O00716 465 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 STX16O14662 325 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 WNT9AO14904 365 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 INPP4BO15327 924 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 GSC2O15499 205 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LILRB5O75023 590 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ADAM23O75077 832 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 EGFP01133 1207 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 APODP05090 189 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ADRB3P13945 408 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 GFAPP14136 432 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ATP1B2P14415 290 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 NCF2P19878 526 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 COL9A1P20849 921 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 XPAP23025 273 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 DGKAP23743 735 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 PTPN4P29074 926 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TIE1P35590 1138 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CPOXP36551 454 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 PPARGP37231 505 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 GDF5P43026 501 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TNFRSF4P43489 277 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 PSMD8P48556 350 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SEC13P55735 322 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 RPS14P62263 151 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CLCQ05315 142 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 NAA25Q14CX7 972 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 PCBP2Q15366 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 PDCD2Q16342 344 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TMEM196Q5HYL7 178 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 METTL21CQ5VZV1 264 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZDHHC20Q5W0Z9 365 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SEL1L3Q68CR1 1132 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 FBXL19Q6PCT2 694 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LARP4Q71RC2 724 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 ERN2Q76MJ5 926 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TRIM74Q86UV6 250 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LONP2Q86WA8 852 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 NRSN1Q8IZ57 195 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CLYBLQ8N0X4 340 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CPSF7Q8N684 471 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LILRA3Q8N6C8 439 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 DDHD1Q8NEL9 900 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 AGAP11Q8TF27 550 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SREK1Q8WXA9 508 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 AP2M1Q96CW1 435 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 P2RY13Q9BPV8 354 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CCDC28BQ9BUN5 200 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 RSPH9Q9H1X1 276 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 STN1Q9H668 368 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CD248Q9HCU0 757 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SEMA4BQ9NPR2 832 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TCF7L2Q9NQB0 619 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TXLNGQ9NUQ3 528 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 KCTD5Q9NXV2 234 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CD274Q9NZQ7 290 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 GULP1Q9UBP9 304 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 GIMAP2Q9UG22 337 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 EIF2B4Q9UI10 523 aaKnown RBP8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 TIMM22Q9Y584 194 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 DNAJC15Q9Y5T4 150 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 SCN8AQ9UQD0 1980 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 CHD7Q9P2D1 2997 aa8.49□□□□□ -1.05
HMGN1P34-201ENST00000413023 LOC100653049A0A140TA62 436 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 OR2AG2A6NM03 316 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 C2CD4DB7Z1M9 353 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 SLCO1B7G3V0H7 640 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 OR7A17O14581 309 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 MID1O15344 667 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 DCXO43602 365 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 NUAK1O60285 661 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 GPC4O75487 556 aa8.48□□□□□ -1.05
HMGN1P34-201ENST00000413023 SKAP2O75563 359 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms