RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 HMG20BQ9P0W2 317 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 WDR17Q8IZU2 1322 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 A0A0A6YYC8 382 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 CLRN2A0PK11 232 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 YDJCA8MPS7 323 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 AKR1B15C9JRZ8 316 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 KLRF2D3W0D1 207 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 I3L1I5 382 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ATP2A1O14983 1001 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 NEURL1O76050 574 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 KCNK5O95279 499 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 MOCS3O95396 460 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PTBP3O95758 552 aaKnown RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 VPREB1P12018 145 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ARF4P18085 180 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 GNAZP19086 355 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 AHCYP23526 432 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 AZGP1P25311 298 aaKnown RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 RYKP34925 604 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 SLC16A2P36021 539 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PRCPP42785 496 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 FASLGP48023 281 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PTENP60484 403 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PPP2R2BQ00005 443 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PRKCEQ02156 737 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 NHLH1Q02575 133 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 SLC18A2Q05940 514 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 KRTAP1-1Q07627 177 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 FOXF2Q12947 444 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 STIM1Q13586 685 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 TRADDQ15628 312 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 SMN1Q16637 294 aaKnown RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 SLC9C1Q4G0N8 1177 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 GLIPR1L2Q4G1C9 344 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 CES5AQ6NT32 575 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 SLC25A24Q6NUK1 477 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 TOM1L2Q6ZVM7 507 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PLEKHM3Q6ZWE6 761 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 FAM57BQ71RH2 274 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 RD3Q7Z3Z2 195 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 WDR5BQ86VZ2 330 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 CCDC25Q86WR0 208 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF595Q8IYB9 648 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 OTUD6BQ8N6M0 293 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 HUS1BQ8NHY5 278 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 TAS1R2Q8TE23 839 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 FAM216AQ8WUB2 273 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 HDAC7Q8WUI4 952 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 HEXDCQ8WVB3 486 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 KAT2AQ92830 837 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ATOH1Q92858 354 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 CDCA5Q96FF9 252 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 CNDP1Q96KN2 507 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 HARBI1Q96MB7 349 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 KCNK16Q96T55 309 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 TXN2Q99757 166 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 MXRA8Q9BRK3 442 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ISCUQ9H1K1 167 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 R3HDMLQ9H3Y0 253 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 HIPK3Q9H422 1215 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PAPOLBQ9NRJ5 636 aaKnown RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 DNAJC11Q9NVH1 559 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 PRMT7Q9NVM4 692 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 EXTL2Q9UBQ6 330 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 FAM205AQ6ZU69 1335 aa4.46□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF335Q9H4Z2 1342 aaPredicted RBP4.46□□□□□ -1.69
BRCA1-204ENST00000412061 C5orf52A6NGY3 159 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 HSPB2A8KAH6 182 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 KPNA7A9QM74 516 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 GPR89AB7ZAQ6 455 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 F8W810 466 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 RHODO00212 210 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 KIF1CO43896 1103 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 NME6O75414 186 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 DAB1O75553 588 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CRCPO75575 148 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 PALMO75781 387 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 LATS1O95835 1130 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SLC16A8O95907 504 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 FGBP02675 491 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SLPIP03973 132 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 WNT1P04628 370 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CYC1P08574 325 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 GPR89BP0CG08 455 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 VCLP18206 1134 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 BMP5P22003 454 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 KELP23276 732 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CERS1P27544 350 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SERPINB6P35237 376 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 WNT5AP41221 380 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ARCN1P48444 511 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CLCN5P51795 746 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 UCP2P55851 309 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 RPS13P62277 151 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TRA2BP62995 288 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SIRPAP78324 504 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 MRPS34P82930 218 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 GHRHRQ02643 423 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms