RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ARHGEF40Q8TER5 1519 aa3.85□□□□□ -1.79
PMS1-203ENST00000409593 FRMD3A2A2Y4 597 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 CYSRT1A8MQ03 144 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 CLIC2O15247 247 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 USO1O60763 962 aaKnown RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 TPPPO94811 219 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 RB1P06400 928 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 GNAZP19086 355 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 TECRLQ5HYJ1 363 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 ARHGAP11AQ6P4F7 1023 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 CHST9Q7L1S5 443 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 GALNT13Q8IUC8 556 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 TEX19Q8NA77 164 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 PPHLN1Q8NEY8 458 aaKnown RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 ZNF473Q8WTR7 871 aaKnown RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 C17orf77Q96MU5 243 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 SLX1AQ9BQ83 275 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 PSD2Q9BQI7 771 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 FSD1Q9BTV5 496 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 APOBEC3GQ9HC16 384 aaKnown RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 ZNF624Q9P2J8 865 aaPredicted RBP3.84□□□□□ -1.79
PMS1-203ENST00000409593 CMAHPQ9Y471 501 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 LYVE1Q9Y5Y7 322 aa3.84□□□□□ -1.79
PMS1-203ENST00000409593 H0YIN7 160 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 BLOC1S5-TXNDC5H3BN57 136 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 TUBBP07437 444 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 MAPK4P31152 587 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 MMP15P51511 669 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 HILS1P60008 231 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 DCAF7P61962 342 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 TUBB4BP68371 445 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 PPP2R2BQ00005 443 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 SPOCK1Q08629 439 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 DUOXA1Q1HG43 343 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 TPRG1Q6ZUI0 275 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 PTOV1Q86YD1 416 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 ARID3BQ8IVW6 561 aaPredicted RBP3.84□□□□□ -1.8
PMS1-203ENST00000409593 CEP97Q8IW35 865 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 FAM76AQ8TAV0 307 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 SEMA4DQ92854 862 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 HGH1Q9BTY7 390 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 SLC52A3Q9NQ40 469 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 FBXL17Q9UF56 701 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 TSPYL4Q9UJ04 414 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 PNMA2Q9UL42 364 aa3.84□□□□□ -1.8
PMS1-203ENST00000409593 A0A0G2JLW4 131 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 OR2M5A3KFT3 312 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 TMEM8BA6NDV4 472 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 AP3D1O14617 1153 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 PCDH7O60245 1069 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 CGAP01215 116 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 GABRB1P18505 474 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 MSH3P20585 1137 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 PON1P27169 355 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 ARF3P61204 181 aaPredicted RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 ARF1P84077 181 aaKnown RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 RARS2Q5T160 578 aaKnown RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 RBMS3Q6XE24 437 aaKnown RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 ZNF534Q76KX8 674 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 TRPT1Q86TN4 253 aaKnown RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 SCYL3Q8IZE3 742 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 SMPDL3BQ92485 455 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 WBP2Q969T9 261 aa3.83□□□□□ -1.8
PMS1-203ENST00000409593 SRSF8Q9BRL6 282 aaKnown RBP3.83□□□□□ -1.8
PMS1-203ENST00000409593 DUXAA6NLW8 204 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 OR2C1O95371 312 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 PATE4P0C8F1 98 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 CHRNB4P30926 498 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 NR2C2P49116 596 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 NR0B1P51843 470 aaKnown RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 ZC2HC1CQ53FD0 456 aaPredicted RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 CERS3Q8IU89 383 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 FCAMRQ8WWV6 532 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 RBM4Q9BWF3 364 aaKnown RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 C1QTNF1Q9BXJ1 281 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 BARHL1Q9BZE3 327 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 DENND2DQ9H6A0 471 aaPredicted RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 ZBTB20Q9HC78 741 aaPredicted RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 PAG1Q9NWQ8 432 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 MIOSQ9NXC5 875 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 ZNF69Q9UC07 566 aa3.82□□□□□ -1.8
PMS1-203ENST00000409593 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.82□□□□□ -1.8
PMS1-203ENST00000409593 F5H0A9 414 aaPredicted RBP3.81□□□□□ -1.8
PMS1-203ENST00000409593 GH2P01242 217 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 CKMT2P17540 419 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 EPHA2P29317 976 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 ALDH4A1P30038 563 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 HADHAP40939 763 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 PSMC4P43686 418 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 HSD17B4P51659 736 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 C15orf39Q6ZRI6 1047 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 TBC1D1Q86TI0 1168 aaPredicted RBP3.81□□□□□ -1.8
PMS1-203ENST00000409593 TTC39CQ8N584 583 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 WDSUB1Q8N9V3 476 aa3.81□□□□□ -1.8
PMS1-203ENST00000409593 ZNF248Q8NDW4 579 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms