RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ADGRG2Q8IZP9 1017 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 C1orf127Q8N9H9 656 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 B3GNT5Q9BYG0 378 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 OR2AG1Q9H205 316 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 DPEP3Q9H4B8 488 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 POMKQ9H5K3 350 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 OSGEPQ9NPF4 335 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TIMMDC1Q9NPL8 285 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ARHGAP28Q9P2N2 729 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TMED5Q9Y3A6 229 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RPS6KL1Q9Y6S9 549 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ASTN1O14525 1302 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SULT1B1O43704 296 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SGTAO43765 313 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SMNDC1O75940 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SEC24AO95486 1093 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TFPIP10646 304 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RPS2P15880 293 aaKnown RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RRM2P31350 389 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 IRS1P35568 1242 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SERPINB9P50453 376 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ACY1Q03154 408 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 MPP3Q13368 585 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 NFYCQ13952 458 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 NEDD8Q15843 81 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SLC25A52Q3SY17 297 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 KIAA0895LQ68EN5 471 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TMEM220Q6QAJ8 160 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RBFAQ8N0V3 343 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RIBC1Q8N443 379 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 AMER2Q8N7J2 671 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SETD9Q8NE22 299 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ZFP28Q8NHY6 868 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 COX4I2Q96KJ9 171 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 GAL3ST4Q96RP7 486 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 FRMD8Q9BZ67 464 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ABCB10Q9NRK6 738 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 PCDHGA10Q9Y5H3 936 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 A0A087X0B3 334 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 MATN4O95460 622 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TBX18O95935 607 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 CALB2P22676 271 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 CSNK2BP67870 215 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SNTA1Q13424 505 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF542PQ5EBM4 170 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 OLFML2AQ68BL7 652 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SYDE1Q6ZW31 735 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 SLC44A2Q8IWA5 706 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 ITFG1Q8TB96 612 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 KLHL6Q8WZ60 621 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TGM7Q96PF1 710 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 CSPG4P5Q96PW8 444 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 AIF1LQ9BQI0 150 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 AIFM2Q9BRQ8 373 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 TWSG1Q9GZX9 223 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 MGAT4AQ9UM21 535 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 POFUT2Q9Y2G5 429 aa7.23□□□□□ -1.25
SCN9A-202ENST00000409435 RBMX2Q9Y388 322 aaKnown RBP7.23□□□□□ -1.25
SCN9A-202ENST00000409435 MYOM1P52179 1685 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ESYT3A0FGR9 886 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SDR42E2A6NKP2 422 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 UPK3BL1B0FP48 263 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 UPK3BL2E5RIL1 263 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 LINC01565O15544 149 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ADRB2P07550 413 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 GOT1P17174 413 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SLC9A3P48764 834 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TSNQ15631 228 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TYW3Q6IPR3 259 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PSAPL1Q6NUJ1 521 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 OR8H1Q8NGG4 311 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 NETO1Q8TDF5 533 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ZDHHC1Q8WTX9 485 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FAR1Q8WVX9 515 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HTR3CQ8WXA8 447 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 GATAD2BQ8WXI9 593 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 OR2M4Q96R27 311 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ZBP1Q9H171 429 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 RERGLQ9H628 205 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FBXW11Q9UKB1 542 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 OR14I1A6ND48 311 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 METTL21EPA6NDL7 271 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 NOL4O94818 638 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CD2BP2O95400 341 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HIST1H2ABP04908 130 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF8P17098 575 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ADSLP30566 484 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 MAGEA6P43360 314 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PREPP48147 710 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 NUDT2P50583 147 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ELAVL3Q14576 367 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SWT1Q5T5J6 900 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ABHD17BQ5VST6 288 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HIST3H2AQ7L7L0 130 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CHERPQ8IWX8 916 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SRFBP1Q8NEF9 429 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms