RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ERP44Q9BS26 406 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 KLK13Q9UKR3 277 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 NEUROG3Q9Y4Z2 214 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 MAD1L1Q9Y6D9 718 aa19.5■□□□□ 0.71
PDLIM2-207ENST00000409417 TRBV23OR9-2A0A075B6M9 112 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 RHPN2P1A8MT19 583 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 PDZK1P1A8MUH7 402 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 NDC80O14777 642 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 TP73O15350 636 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 RAD51CO43502 376 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 SPINK2P20155 84 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 RPL10P27635 214 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 ARCN1P48444 511 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 ITGA8P53708 1063 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 BIRC2Q13490 618 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 NR1D2Q14995 579 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 METRNLQ641Q3 311 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 FAM83HQ6ZRV2 1179 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 PDIK1LQ8N165 341 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 CACTIN-AS1Q8N1I8 211 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 AVL9Q8NBF6 648 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 VPS37BQ9H9H4 285 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 SARS2Q9NP81 518 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 MARCH4Q9P2E8 410 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 RPS6KL1Q9Y6S9 549 aa19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 TPRP12270 2363 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-207ENST00000409417 C17orf113A0A1B0GUU1 675 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 QSOX1O00391 747 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 PPM1DO15297 605 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 OR1I1O60431 355 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 JUPP14923 745 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 PBLDP30039 288 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 GPR3P46089 330 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 RPL21P46778 160 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 TTPAP49638 278 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 DRG2P55039 364 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CLDN6P56747 220 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 NFE2L1Q14494 772 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SEMA3AQ14563 771 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SEPT7Q16181 437 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CDCP2Q5VXM1 449 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SPRED1Q7Z699 444 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SLC9B2Q86UD5 537 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CCNJLQ8IV13 435 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 Q8N9G6 341 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 BBOF1Q8ND07 529 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 STAMBPL1Q96FJ0 436 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 FCRL3Q96P31 734 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 TRIM56Q9BRZ2 755 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SCHIP1Q9P0W5 487 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 ACSL5Q9ULC5 683 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 SNX24Q9Y343 169 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 MRFAP1Q9Y605 127 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 ZCWPW2A0A1B0GU75 182 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 ZW10O43264 779 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 TCEA3O75764 348 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 USP1O94782 785 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 MT-CO3P00414 261 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 GSTM1P09488 218 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 BRAFP15056 766 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 XRCC1P18887 633 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 GSTM4Q03013 218 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 MSS51Q4VC12 460 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 MRNIPQ6NTE8 343 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CCNI2Q6ZMN8 369 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 DCBLD1Q8N8Z6 715 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 ZNF669Q96BR6 464 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CCM2Q9BSQ5 444 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 STN1Q9H668 368 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CPNE7Q9UBL6 633 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 CLCA2Q9UQC9 943 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 WDR37Q9Y2I8 494 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 MSRB2Q9Y3D2 182 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 PRSS21Q9Y6M0 314 aa19.48■□□□□ 0.71
PDLIM2-207ENST00000409417 FAM149AA5PLN7 773 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 F8W8V4 182 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 NTN3O00634 580 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 RPLP0P05388 317 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 POLBP06746 335 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 PGAM1P18669 254 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 UBE2IP63279 158 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 HHEXQ03014 270 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 DHX9Q08211 1270 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 HIF1AQ16665 826 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 ZNF658BQ4V348 819 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 DUPD1Q68J44 220 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 NEPROQ6NW34 567 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 SDCCAG8Q86SQ7 713 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 LDB1Q86U70 411 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 GPR150Q8NGU9 434 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 HM13Q8TCT9 377 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 SH3KBP1Q96B97 665 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 EBNA1BP2Q99848 306 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 NAT9Q9BTE0 207 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 LRRN3Q9H3W5 708 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 WHRNQ9P202 907 aa19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 ZNF624Q9P2J8 865 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-207ENST00000409417 UTP11Q9Y3A2 253 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms