RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ADAM17P78536 824 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 FMO1Q01740 532 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SLC18A2Q05940 514 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 FCHO2Q0JRZ9 810 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 FZD5Q13467 585 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 KRR1Q13601 381 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 MESDQ14696 234 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 DRAP1Q14919 205 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 PUM3Q15397 648 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 KNOP1Q1ED39 458 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 LETM2Q2VYF4 491 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 LSM12Q3MHD2 195 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 DCAF17Q5H9S7 520 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 HYIQ5T013 277 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CCNJQ5T5M9 372 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ATXN7L2Q5T6C5 722 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 ATAD3BQ5T9A4 648 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 LGSNQ5TDP6 509 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 IRAK1BP1Q5VVH5 260 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PLEKHA7Q6IQ23 1121 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 NANOGP8Q6NSW7 305 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 XRRA1Q6P2D8 792 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 DRICH1Q6PGQ1 229 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 C4orf22Q6V702 233 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 GSTA5Q7RTV2 222 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 AKAP14Q86UN6 197 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CARM1Q86X55 608 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ZNF276Q8N554 614 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 TMCO5AQ8N6Q1 288 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PACRGLQ8N7B6 248 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 MIGA1Q8NAN2 632 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 OR6B3Q8NGW1 331 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SH3RF3Q8TEJ3 882 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 LRRC15Q8TF66 581 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 C1orf54Q8WWF1 131 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PSPC1Q8WXF1 523 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 TFAP2CQ92754 450 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ARHGEF26Q96DR7 871 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 MAGED4Q96JG8 741 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SGCZQ96LD1 299 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ZNF347Q96SE7 839 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PARK7Q99497 189 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 CPPED1Q9BRF8 314 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 RTKNQ9BST9 563 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 EFHD1Q9BUP0 239 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SHCBP1LQ9BZQ2 653 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SMARCAD1Q9H4L7 1026 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 MARCH7Q9H992 704 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CPNE5Q9HCH3 593 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PNPLA8Q9NP80 782 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 MCM9Q9NXL9 1143 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 DLL3Q9NYJ7 618 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 STMN3Q9NZ72 180 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 FNIP2Q9P278 1114 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CPNE7Q9UBL6 633 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CLCA2Q9UQC9 943 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 JAG2Q9Y219 1238 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 MED16Q9Y2X0 877 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 HELZ2Q9BYK8 2649 aaKnown RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 ZNF536O15090 1300 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 WDR91A4D1P6 747 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PRSS29PA6NIE9 313 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SDR42E2A6NKP2 422 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 B8ZZF3 427 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CLDN25C9JDP6 229 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 H3BMQ9 156 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 COPEO14579 308 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SLC22A2O15244 555 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CLDN3O15551 220 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PSTPIP1O43586 416 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ASNA1O43681 348 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TSPAN1O60635 241 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GCATO75600 419 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CLPXO76031 633 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 IPO13O94829 963 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 BCL10O95999 233 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CSF1RP07333 972 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TFPTP0C1Z6 253 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CHRNB2P17787 502 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CCNA2P20248 432 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 BGNP21810 368 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 IFNA8P32881 189 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PSMC2P35998 433 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 PHKA1P46020 1223 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ALDH18A1P54886 795 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 CTAG1AP78358 180 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GRSF1Q12849 480 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLK1-202ENST00000409403 FLOT2Q14254 428 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 HABP2Q14520 560 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 UBXN2BQ14CS0 331 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 RAB30Q15771 203 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TIGD2Q4W5G0 525 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TMTC4Q5T4D3 741 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZNF618Q5T7W0 954 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CYP4A22Q5TCH4 519 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PPP1R2P3Q6NXS1 205 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 MROH5Q6ZUA9 1318 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 STXBP4Q6ZWJ1 553 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms