RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SPEM2Q0P670 501 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 FBXO38Q6PIJ6 1188 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 FAM136AQ96C01 138 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 VPS39Q96JC1 886 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 AARSD1Q9BTE6 412 aaKnown RBP32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 IKBKGQ9Y6K9 419 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 SYPP08247 313 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 INHBAP08476 426 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 NUDT17P0C025 328 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 ACP5P13686 325 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 OTOGLQ3ZCN5 2332 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 ACVR1CQ8NER5 493 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 PHOX2BQ99453 314 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 ZDHHC5Q9C0B5 715 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 FAM8A1Q9UBU6 413 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 ST14Q9Y5Y6 855 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 CTSEP14091 401 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 SPRP35270 261 aaPredicted RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 INSCQ1MX18 579 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 ZNF423Q2M1K9 1284 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 PRRT3Q5FWE3 981 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 CCL4L1Q8NHW4 92 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 DCAKDQ8WVC6 231 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 LINC00615Q96LM1 132 aaPredicted RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 CCM2Q9BSQ5 444 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 GTPBP2Q9BX10 602 aaKnown RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 GAREM1Q9H706 876 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 TRNAU1APQ9NX07 287 aaKnown RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 CORO1CQ9ULV4 474 aaPredicted RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 PLAAQ9Y263 795 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 DNAJC16Q9Y2G8 782 aa32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 MTO1Q9Y2Z2 717 aaKnown RBP32.75■■■□□ 2.83
CSNK1E-204ENST00000403904 H3BMM5 538 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 FTH1P02794 183 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 ZNF806P0C7X5 589 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 ENGP17813 658 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 CHRM3P20309 590 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 LIMK2P53671 638 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 HNRNPKP61978 463 aaKnown RBP eCLIP32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 IL27RAQ6UWB1 636 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 AMZ2Q86W34 360 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 OXR1Q8N573 874 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 OR2I1PQ8NGU4 316 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 DHRS4Q9BTZ2 278 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 LRRC61Q9BV99 259 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 IL21RQ9HBE5 538 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 GULP1Q9UBP9 304 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 MED16Q9Y2X0 877 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 COMMD10Q9Y6G5 202 aa32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 DNMT3AQ9Y6K1 912 aaPredicted RBP32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 ZFC3H1O60293 1989 aaKnown RBP32.74■■■□□ 2.83
CSNK1E-204ENST00000403904 FAM95CA0A1B0GW59 222 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 PROB1E7EW31 1015 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 F8W8V4 182 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 H3BM21 787 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 SDC3O75056 442 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 ARRB1P49407 418 aaPredicted RBP32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 CTBSQ01459 385 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 NHLH1Q02575 133 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 C1orf61Q13536 156 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 SF3A2Q15428 464 aaKnown RBP32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 NAPRTQ6XQN6 538 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 ELMO2Q96JJ3 720 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 KLC4Q9NSK0 619 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 GALPQ9UBC7 116 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 FETUBQ9UGM5 382 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 KCNK6Q9Y257 313 aa32.73■■■□□ 2.83
CSNK1E-204ENST00000403904 CABIN1Q9Y6J0 2220 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 E5RI56 91 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 CELA2BP08218 269 aaPredicted RBP32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 SAT1P21673 171 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 IL9RQ01113 521 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 SHBQ15464 509 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 HECTD2Q5U5R9 776 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 PANX3Q96QZ0 392 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 TIMM29Q9BSF4 260 aa32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 SARS2Q9NP81 518 aaKnown RBP32.72■■■□□ 2.83
CSNK1E-204ENST00000403904 LNP1A1A4G5 178 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 ITGA2BP08514 1039 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 AK4P27144 223 aaPredicted RBP32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 RXRGP48443 463 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 CDKN2DP55273 166 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 ARHGAP8P85298 464 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 IFFO1Q0D2I5 559 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 BNIP3Q12983 259 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 SPNS2Q8IVW8 549 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 OR2L2Q8NH16 312 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 EPS8L3Q8TE67 593 aaKnown RBP32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 ELMO1Q92556 727 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 KCNJ9Q92806 393 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 TSSK1BQ9BXA7 367 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 SEMA4GQ9NTN9 838 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 SLC24A2Q9UI40 661 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 ZNF180Q9UJW8 692 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 VWA7Q9Y334 891 aa32.71■■■□□ 2.83
CSNK1E-204ENST00000403904 MGAT4DA6NG13 374 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 CCR7P32248 378 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 SLCO1A2P46721 670 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 PGGT1BP53609 377 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 TIAL1Q01085 375 aaKnown RBP eCLIP32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms