RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CRY1Q16526 586 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 PPP1R3AQ16821 1122 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 ZNF765Q7L2R6 523 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 RAB7BQ96AH8 199 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 NSUN5Q96P11 429 aaKnown RBP25.25■■□□□ 1.63
CPNE1-205ENST00000401607 C1QTNF3Q9BXJ4 246 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 NUF2Q9BZD4 464 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 ARL8BQ9NVJ2 186 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 TMCO1Q9UM00 188 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 CFAP99D6REC4 459 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 NEMP1O14524 444 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 MID1O15344 667 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 MSH3P20585 1137 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 AOAHP28039 575 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 CST6Q15828 149 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 FBXO48Q5FWF7 155 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 CACUL1Q86Y37 369 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 AADATQ8N5Z0 425 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 NUS1Q96E22 293 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 OR52B2Q96RD2 323 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 UTP6Q9NYH9 597 aaKnown RBP25.24■■□□□ 1.63
CPNE1-205ENST00000401607 NUDT4Q9NZJ9 180 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 PRDM4Q9UKN5 801 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 ADAMTS6Q9UKP5 1117 aa25.24■■□□□ 1.63
CPNE1-205ENST00000401607 AP2A2O94973 939 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CBSLP0DN79 551 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CBSP35520 551 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 AGTR2P50052 363 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 GBX1Q14549 363 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 KRT72Q14CN4 511 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 LDLRAP1Q5SW96 308 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 STON2Q8WXE9 905 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 FAM161BQ96MY7 647 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CCDC106Q9BWC9 280 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 WDR55Q9H6Y2 383 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CD274Q9NZQ7 290 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 TRIM33Q9UPN9 1127 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CAPN14A8MX76 684 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 PPP6CO00743 305 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 ATP5HO75947 161 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 E2F5Q15329 346 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 PDCD2Q16342 344 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-205ENST00000401607 TREML1Q86YW5 311 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 PPP1R36Q96LQ0 422 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 TRPV5Q9NQA5 729 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CNOT6Q9ULM6 557 aaKnown RBP25.23■■□□□ 1.63
CPNE1-205ENST00000401607 CAPN7Q9Y6W3 813 aa25.23■■□□□ 1.63
CPNE1-205ENST00000401607 SPTBN5Q9NRC6 3674 aaKnown RBP25.23■■□□□ 1.63
CPNE1-205ENST00000401607 LZTS3O60299 673 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-205ENST00000401607 CDK14O94921 469 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 EGFP01133 1207 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 UBAP2LQ14157 1087 aaKnown RBP25.22■■□□□ 1.63
CPNE1-205ENST00000401607 AGBL4Q5VU57 503 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 FAM219BQ5XKK7 198 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 ANKS6Q68DC2 871 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 FRA10AC1Q70Z53 315 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 ASRGL1Q7L266 308 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 PTCD3Q96EY7 689 aaKnown RBP25.22■■□□□ 1.63
CPNE1-205ENST00000401607 ASB2Q96Q27 587 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 FAM126AQ9BYI3 521 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-205ENST00000401607 TCF7L2Q9NQB0 619 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 OARD1Q9Y530 152 aa25.22■■□□□ 1.63
CPNE1-205ENST00000401607 GOLGA8QA0A0J9YX86 632 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 GOLGA8OA6NCC3 632 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 GOLGA8NF8WBI6 632 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 K7ESM1 405 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 INPP4BO15327 924 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SNX2O60749 519 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 TAS2R38P59533 333 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SH3BP2P78314 561 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 CLCQ05315 142 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 PON2Q15165 354 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 KIAA1211LQ6NV74 962 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 RASGEF1AQ8N9B8 481 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 CXorf40AQ8TE69 158 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 ZNF483Q8TF39 744 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 DLG3Q92796 817 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 HEBP1Q9NRV9 189 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 PCTPQ9UKL6 214 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 FIS1Q9Y3D6 152 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 ASB1Q9Y576 335 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 BRWD1Q9NSI6 2320 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 A0A1W2PPC1 479 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 EIF3FO00303 357 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SYNCRIPO60506 623 aaKnown RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 ADH1BP00325 375 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 ENO3P13929 434 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 EPHA3P29320 983 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 COPAP53621 1224 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 DPTQ07507 201 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 TMEM196Q5HYL7 178 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 BEND7Q8N7W2 519 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 PDPRQ8NCN5 879 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 TRPC4APQ8TEL6 797 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SLC7A6OSQ96CW6 309 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-205ENST00000401607 FAR2Q96K12 515 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 GABRG3Q99928 467 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 KCNK12Q9HB15 430 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SERGEFQ9UGK8 458 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 SORCS3Q9UPU3 1222 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms