RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RFTN2Q52LD8 501 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 GPAT3Q53EU6 434 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 MED27Q6P2C8 311 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 SLC22A17Q8WUG5 538 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 ANKRD66B4E2M5 251 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 CNMDO75829 334 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 CNTN5O94779 1100 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 MAPK10P53779 464 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 SIX1Q15475 284 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 CHMP1BQ7LBR1 199 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZNF280BQ86YH2 543 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCDC177Q9NQR7 707 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 PCDHGA11Q9Y5H2 935 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 FAM47E-STBD1D6RA91 191 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 FFAR2O15552 330 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 TYROBPO43914 113 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 PRAMEF11O60813 436 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 KERAO60938 352 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCNDBP1O95273 360 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 WASP42768 502 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 OLIG2Q13516 323 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 LAPTM5Q13571 262 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 LDLRAP1Q5SW96 308 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 PSRC1Q6PGN9 363 aaPredicted RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 TMEM220Q6QAJ8 160 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 SRFBP1Q8NEF9 429 aaKnown RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 RNFT2Q96EX2 444 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 Q96MT0 163 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 GNEQ9Y223 722 aaKnown RBP14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 INSL6Q9Y581 213 aa14.06□□□□□ -0.16
PCDHGA11-201ENST00000398587 PRR23D1E9PI22 279 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 G3V2T6 193 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 LIN7AO14910 233 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 PRR23D2P0DMB1 279 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ACTR3P61158 418 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 COPZ1P61923 177 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ECT2LQ008S8 904 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 SPIBQ01892 262 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 TRAF3Q13114 568 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 CDC73Q6P1J9 531 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 AUTS2Q8WXX7 1259 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RAD51AP1Q96B01 352 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 CLN6Q9NWW5 311 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RHBDL2Q9NX52 303 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RAB23Q9ULC3 237 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 TTC24A2A3L6 582 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 BEST1O76090 585 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 GNAZP19086 355 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCNYL2Q5T2Q4 361 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 GATAD2AQ86YP4 633 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZNF540Q8NDQ6 660 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 MYDGFQ969H8 173 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 C6orf62Q9GZU0 229 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 MRM3Q9HC36 420 aaKnown RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCNB1IP1Q9NPC3 277 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZMYND8Q9ULU4 1186 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 COMMD3-BMI1R4GMX3 469 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 KAT6AQ92794 2004 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 LINC00854A0A1B0GVQ3 168 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 GSAPA4D1B5 854 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 NDUFS2O75306 463 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 SCELO95171 688 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 UGT1A6P19224 532 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 UGT1A1P22309 533 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 UGT1A4P22310 534 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 UGT1A3P35503 534 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 UGT1A5P35504 534 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ERVK-8P63133 956 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 C2orf80Q0P641 193 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 DCTN2Q13561 401 aaKnown RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 LYSMD3Q7Z3D4 306 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 HIPK1Q86Z02 1210 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 OR8H2Q8N162 312 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZNF514Q96K75 400 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 C3orf14Q9HBI5 128 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZDHHC3Q9NYG2 299 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 SLC7A8Q9UHI5 535 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RAB26Q9ULW5 256 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ZNF780BQ9Y6R6 833 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 FPGTO14772 594 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 TSPAN19P0C672 248 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 RING1Q06587 406 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 USP39Q53GS9 565 aaKnown RBP14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 SPANXN2Q5MJ10 180 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 OR7A2PQ8NGA2 310 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 SYT11Q9BT88 431 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 HMG20AQ9NP66 347 aa14.05□□□□□ -0.16
PCDHGA11-201ENST00000398587 ENPP3O14638 875 aa14.04□□□□□ -0.16
PCDHGA11-201ENST00000398587 OR10H2O60403 315 aa14.04□□□□□ -0.16
PCDHGA11-201ENST00000398587 SIX3O95343 332 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms