RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IGDCC3Q8IVU1 814 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 DEFB123Q8N688 67 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CLDN19Q8N6F1 224 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SCAMP4Q969E2 229 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CCT7Q99832 543 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 FAM83CQ9BQN1 747 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 FAIM2Q9BWQ8 316 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PHF7Q9BWX1 381 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LMAN1LQ9HAT1 526 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 KLC4Q9NSK0 619 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SLC17A6Q9P2U8 582 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 STOML1Q9UBI4 398 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 HS3ST2Q9Y278 367 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 YBX2Q9Y2T7 364 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 NDUFAF1Q9Y375 327 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 TK2O00142 265 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 MID1O15344 667 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SNX3O60493 162 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ECI2O75521 394 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 EIF2S1P05198 315 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ITGB7P26010 798 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CHI3L1P36222 383 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CTSOP43234 321 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 MRPS21P82921 87 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PRKG2Q13237 762 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PTPRCAPQ14761 206 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ZNF77Q15935 545 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CHSY3Q70JA7 882 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 RRM2BQ7LG56 351 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 JADE3Q92613 823 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 FATE1Q969F0 183 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GBP5Q96PP8 586 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 IPPKQ9H8X2 491 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ATAD3AQ9NVI7 634 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 EP400Q96L91 3159 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 NEMP2A6NFY4 417 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC160A6NGH7 325 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GRID2O43424 1007 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 DCXO43602 365 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 EDF1O60869 148 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PEX11AO75192 247 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GABBR2O75899 941 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CLDN9O95484 217 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CFIP05156 583 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PDHA1P08559 390 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CMPK1P30085 196 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 MAGEA6P43360 314 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 HSPA7P48741 367 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PNLIPRP1P54315 467 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ARF5P84085 180 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LRRC74AQ0VAA2 488 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 TMEM115Q12893 351 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SMAD4Q13485 552 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LAPTM5Q13571 262 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 KRT72Q14CN4 511 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 KDELC1Q6UW63 502 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 OTUB1Q96FW1 271 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PLEKHG4BQ96PX9 1271 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 IL21Q9HBE4 155 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 POPDC3Q9HBV1 291 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 HEBP1Q9NRV9 189 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 FAM32AQ9Y421 112 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 AGPSO00116 658 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SH3BGRLO75368 114 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CPSF4O95639 269 aaKnown RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CHRM1P11229 460 aaPredicted RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 S100A3P33764 101 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 TNFRSF4P43489 277 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SLC6A11P48066 632 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 LEPRP48357 1165 aaKnown RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PLIN5Q00G26 463 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 AP5B1Q2VPB7 878 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 TIFABQ6ZNK6 161 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 RGS9BPQ6ZS82 235 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 TMPRSS11BQ86T26 416 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 TMIEQ8NEW7 156 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PADI4Q9UM07 663 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 H0Y3Z8 333 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 UBXN8O00124 270 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PSMD11O00231 422 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 VEGFDO43915 354 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 IGLV3-27P01718 113 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 C6P13671 934 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 EIF2DP41214 584 aaKnown RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SPINT3P49223 89 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 HNMTP50135 292 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PRKCQQ04759 706 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CLCQ05315 142 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 KYQ8NBH2 561 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 HM13Q8TCT9 377 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SLC22A18Q96BI1 424 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 MIPEPQ99797 713 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms