RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TRIM25Q14258 630 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 NPTX1Q15818 432 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 VPS26BQ4G0F5 336 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 XKR4Q5GH76 650 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 INTS6LQ5JSJ4 861 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 PIK3R6Q5UE93 754 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MARC1Q5VT66 337 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 ZNF773Q6PK81 442 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 IDO2Q6ZQW0 420 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SCD5Q86SK9 330 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SLCO6A1Q86UG4 719 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SNX29P2Q8IUI4 249 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SPPL2BQ8TCT7 592 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 FIG4Q92562 907 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 PEX13Q92968 403 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 TP53INP1Q96A56 240 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MYEOVQ96EZ4 313 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 VMP1Q96GC9 406 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 C8orf48Q96LL4 319 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 DEPDC7Q96QD5 511 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CHID1Q9BWS9 393 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SP110Q9HB58 689 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SARS2Q9NP81 518 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 DDX28Q9NUL7 540 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 UBA2Q9UBT2 640 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 WARS2Q9UGM6 360 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 ZNF221Q9UK13 617 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CNOT6Q9ULM6 557 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 ZSWIM8A7E2V4 1837 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RNF103-CHMP3A0A140T963 221 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ISPDA4D126 451 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SAC3D1A6NKF1 404 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 UBXN8O00124 270 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RAD51BO15315 384 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DLGAP3O95886 979 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CAPN1P07384 714 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 LINC00032P0C843 101 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 IL32P24001 234 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CCNCP24863 283 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PTGS2P35354 604 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ACVRL1P37023 503 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SLC7A2P52569 658 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SCAPQ12770 1279 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TRAP1Q12931 704 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SLC36A3Q495N2 470 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CCNYL2Q5T2Q4 361 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 INTS11Q5TA45 600 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 BROXQ5VW32 411 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SPRYD7Q5W111 196 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SMYD5Q6GMV2 418 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PM20D1Q6GTS8 502 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CRTC3Q6UUV7 619 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FKBP9P1Q75LS8 142 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CBR4Q8N4T8 237 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 KLHDC9Q8NEP7 349 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 HMGCLL1Q8TB92 370 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SNX19Q92543 992 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 LPGAT1Q92604 370 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 HTRA1Q92743 480 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DPF3Q92784 378 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RPRD1AQ96P16 312 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SPON2Q9BUD6 331 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 UPF3AQ9H1J1 476 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 FAM124BQ9H5Z6 455 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 BPIFA1Q9NP55 256 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 C8orf4Q9NR00 106 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 POLE4Q9NR33 117 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 NEU3Q9UQ49 428 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 A0A0D9SEW6 157 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FAM25AB3EWG3 89 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FAM25CB3EWG5 89 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FAM25GB3EWG6 89 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TARM1B6A8C7 271 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 H3BMM5 538 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 POLR1CO15160 346 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 IPO13O94829 963 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 HOXD8P13378 290 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 GFAPP14136 432 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PAMP19021 973 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 OR1E1P30953 314 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RRM2P31350 389 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CDKN1CP49918 316 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SERPINH1P50454 418 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 ZNF157P51786 506 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 CLCQ05315 142 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CDK10Q15131 360 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 UGP2Q16851 508 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 HMBOX1Q6NT76 420 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RANBP10Q6VN20 620 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 LIMS2Q7Z4I7 341 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ZNF467Q7Z7K2 595 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 LACC1Q8IV20 430 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TMEM86AQ8N2M4 240 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SFRP1Q8N474 314 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 C2orf69Q8N8R5 385 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 OR13J1Q8NGT2 312 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DNAJB14Q8TBM8 379 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ZFP90Q8TF47 636 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TTC9Q92623 222 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms