RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 STMND1H3BQB6 276 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 DNALI1O14645 258 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 HGSO14964 777 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SUV39H1O43463 412 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 DNAJC6O75061 913 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SEC31AO94979 1220 aaKnown RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 JCHAINP01591 159 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 MMP2P08253 660 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 ITGA8P53708 1063 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 PLTPP55058 493 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 VSNL1P62760 191 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 ZBTB17Q13105 803 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SQSTM1Q13501 440 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 MORF4L2Q15014 288 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 BRD3Q15059 726 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 RALGPS1Q5JS13 557 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SNAP47Q5SQN1 464 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 ZNF648Q5T619 568 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 ANKS6Q68DC2 871 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 CEP128Q6ZU80 1094 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 USP45Q70EL2 814 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 HOOK3Q86VS8 718 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 MAML1Q92585 1016 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 EID2BQ96D98 161 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TEKT5Q96M29 485 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TDRD1Q9BXT4 1180 aaKnown RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 CEP41Q9BYV8 373 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SPRY4Q9C004 299 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 POLR1EQ9GZS1 481 aaKnown RBP10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TSPYL1Q9H0U9 437 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 GBA3Q9H227 469 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TBC1D29Q9UFV1 150 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 NFU1Q9UMS0 254 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 SHOC2Q9UQ13 582 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 TTLL3Q9Y4R7 772 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
NEDD8-202ENST00000396828 CCDC151A5D8V7 595 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 A6NCN8 305 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 ERI2A8K979 691 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 DYNC1I1O14576 645 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 PSMD3O43242 534 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 ASMTLO95671 621 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 IVDP26440 423 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 CD82P27701 267 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 FASLGP48023 281 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 CARSP49589 748 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 SARNPP82979 210 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 BIRC2Q13490 618 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 KCTD19Q17RG1 926 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 TMEM164Q5U3C3 297 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 ALG1LQ6GMV1 187 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 HIBCHQ6NVY1 386 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 TMEM71Q6P5X7 295 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 PPP1R21Q6ZMI0 780 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 CHST15Q7LFX5 561 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 TIPARPQ7Z3E1 657 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 NLRP8Q86W28 1048 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 FAM129CQ86XR2 697 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 PTRH1Q86Y79 214 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 GALNT13Q8IUC8 556 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 UNC5BQ8IZJ1 945 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 SFRP1Q8N474 314 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 TAB3Q8N5C8 712 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 AGBL5Q8NDL9 886 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 B3GNT4Q9C0J1 378 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 CDH19Q9H159 772 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 ETNK1Q9HBU6 452 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 APMAPQ9HDC9 416 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 KCTD5Q9NXV2 234 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 SLC39A1Q9NY26 324 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 GRHL1Q9NZI5 618 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 PDP2Q9P2J9 529 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 IL17BQ9UHF5 180 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 ZNHIT2Q9UHR6 403 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 PILRAQ9UKJ1 303 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 KCNK6Q9Y257 313 aa10.2□□□□□ -0.78
NEDD8-202ENST00000396828 AAR2Q9Y312 384 aaKnown RBP10.2□□□□□ -0.78
NEDD8-202ENST00000396828 NKX2-8O15522 239 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 DUX1O43812 170 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 RAD1O60671 282 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 ANXA9O76027 345 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 METTL18O95568 372 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 APRTP07741 180 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 NFKB1P19838 968 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 CES1P23141 567 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 PSMB4P28070 264 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 CSTF2P33240 577 aaKnown RBP eCLIP10.19□□□□□ -0.788e-15■■■■□ 21.9
NEDD8-202ENST00000396828 CSRP3P50461 194 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 CDK16Q00536 496 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 NFATC2Q13469 925 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 SEMA5AQ13591 1074 aa10.19□□□□□ -0.78
NEDD8-202ENST00000396828 TRA2AQ13595 282 aaKnown RBP eCLIP10.19□□□□□ -0.78
NEDD8-202ENST00000396828 TRADDQ15628 312 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms