RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 F8W8V4 182 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 UBXN8O00124 270 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 GPC4O75487 556 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 IGLV3-19P01714 112 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 ALOX15P16050 662 aaPredicted RBP12.52□□□□□ -0.41
TRIM39-204ENST00000396548 MSH3P20585 1137 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM23P36406 574 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 CCR10P46092 362 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 NAGLUP54802 743 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 CCDC15Q0P6D6 951 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 RCN2Q14257 317 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF678Q5SXM1 525 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 KIAA1161Q6NSJ0 714 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 TEX101Q9BY14 249 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 SARS2Q9NP81 518 aaKnown RBP12.52□□□□□ -0.41
TRIM39-204ENST00000396548 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
TRIM39-204ENST00000396548 WNT16Q9UBV4 365 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 ADAMTS6Q9UKP5 1117 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 TRPM6Q9BX84 2022 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 DGKAP23743 735 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 GAS6Q14393 721 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 MAVSQ7Z434 540 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SLC22A9Q8IVM8 553 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 DLG3Q92796 817 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SIPA1Q96FS4 1042 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ACSS2Q9NR19 701 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 USP36Q9P275 1121 aaKnown RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 TMEM202A6NGA9 273 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 BTN3A1O00481 513 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 INPP4BO15327 924 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NUAK1O60285 661 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SLCO2B1O94956 709 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SERPINB5P36952 375 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 GPR1P46091 355 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 UNC50Q53HI1 259 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NEK5Q6P3R8 708 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 VRK3Q8IV63 474 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 BEND7Q8N7W2 519 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 DCUN1D1Q96GG9 259 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 LINC00615Q96LM1 132 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM39Q9HCM9 518 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NPHS2Q9NP85 383 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 CA14Q9ULX7 337 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NDRG2Q9UN36 371 aaKnown RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 PCYT1BQ9Y5K3 369 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 CHRNGP07510 517 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NEFHP12036 1026 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 AKT1P31749 480 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 HERVK_113P63132 956 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 RAET1GQ6H3X3 334 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 HIC2Q96JB3 615 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 CNDP1Q96KN2 507 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 LENG8Q96PV6 779 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 NCKIPSDQ9NZQ3 722 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ATXN10Q9UBB4 475 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
TRIM39-204ENST00000396548 TCRBV21S2A2A0A5A6 115 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 CHUKO15111 745 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 TPBGLP0DKB5 382 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 GALNT1Q10472 559 aaPredicted RBP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 IRF4Q15306 451 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 NEK10Q6ZWH5 1172 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 C11orf96Q7Z7L8 435 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM74Q86UV6 250 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 KBTBD6Q86V97 674 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 RMDN2Q96LZ7 410 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 RNF112Q9ULX5 631 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 OARD1Q9Y530 152 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 SLC5A10A0PJK1 596 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 QSOX1O00391 747 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 RAD51BO15315 384 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 PCDH8O95206 1070 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 MPC1LP0DKB6 136 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 TPMTP51580 245 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 PPP2CBP62714 309 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 PPP2CAP67775 309 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms