RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LOC285556D6RIA3 1793 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 PRAMEF33A0A0G2JMD5 474 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ZNF99A8MXY4 864 aaPredicted RBP8.34□□□□□ -1.07
NDE1-202ENST00000396355 PRAMEF10O60809 474 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ABHD2P08910 425 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 SSTR2P30874 369 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 GMPRP36959 345 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 MAN2A2P49641 1150 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 CDH13P55290 713 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 BCAR1P56945 870 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 RPS3AP61247 264 aaKnown RBP8.34□□□□□ -1.07
NDE1-202ENST00000396355 GALK2Q01415 458 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 SP2Q02086 613 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 DSC1Q08554 894 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 TP53BP2Q13625 1128 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 FGL2Q14314 439 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ZACNQ401N2 412 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ZNF404Q494X3 552 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ZNF598Q86UK7 904 aaKnown RBP8.34□□□□□ -1.07
NDE1-202ENST00000396355 BOLLQ8N9W6 283 aaKnown RBP8.34□□□□□ -1.07
NDE1-202ENST00000396355 TRPV3Q8NET8 790 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 MYLIPQ8WY64 445 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 SMG7Q92540 1137 aaKnown RBP8.34□□□□□ -1.07
NDE1-202ENST00000396355 PHF21BQ96EK2 531 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 NSMCE2Q96MF7 247 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 CCDC106Q9BWC9 280 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 TMEM9Q9P0T7 183 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 LIMD1Q9UGP4 676 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 ANAPC2Q9UJX6 822 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 CNTRLQ7Z7A1 2325 aa8.34□□□□□ -1.07
NDE1-202ENST00000396355 FADS2P1A8MWK0 482 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 H3BMM5 538 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 TOR1AO14656 332 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 ATG7O95352 703 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.08
NDE1-202ENST00000396355 NR3C2P08235 984 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 ZNF250P15622 560 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 CD53P19397 219 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 TMBIM6P55061 237 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 IFITM2Q01629 132 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 CHRNEQ04844 493 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 PTP4A2Q12974 167 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 SSX2Q16385 188 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 BCL7AQ4VC05 210 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 PAN3Q58A45 887 aaKnown RBP8.34□□□□□ -1.08
NDE1-202ENST00000396355 TTC23Q5W5X9 447 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.08
NDE1-202ENST00000396355 ING5Q8WYH8 240 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 UROC1Q96N76 676 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 RBM38Q9H0Z9 239 aaKnown RBP8.34□□□□□ -1.08
NDE1-202ENST00000396355 DSN1Q9H410 356 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 LRRC40Q9H9A6 602 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 POLMQ9NP87 494 aaPredicted RBP8.34□□□□□ -1.08
NDE1-202ENST00000396355 SHOC2Q9UQ13 582 aa8.34□□□□□ -1.08
NDE1-202ENST00000396355 CACNA1GO43497 2377 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 C2orf81A6NN90 581 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 TRIM13O60858 407 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 ANGPTL1O95841 491 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 PGK1P00558 417 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 HNRNPLP14866 589 aaKnown RBP eCLIP8.33□□□□□ -1.08
NDE1-202ENST00000396355 CTRB1P17538 263 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 AOC1P19801 751 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 TPMTP51580 245 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 ATP12AP54707 1039 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 RPL7AP62424 266 aaKnown RBP8.33□□□□□ -1.08
NDE1-202ENST00000396355 NOMO3P69849 1222 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 ANGPT1Q15389 498 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 MED22Q15528 200 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 FAM83EQ2M2I3 478 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 Q3C1V9 767 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 HECTD3Q5T447 861 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 STEAP3Q658P3 488 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 CTRB2Q6GPI1 263 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 PM20D1Q6GTS8 502 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 ANGPTL8Q6UXH0 198 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.33□□□□□ -1.08
NDE1-202ENST00000396355 WDR49Q8IV35 697 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 BADQ92934 168 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 TMEM143Q96AN5 459 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 DIRAS2Q96HU8 199 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 PPA2Q9H2U2 334 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 XPNPEP3Q9NQH7 507 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 INTS7Q9NVH2 962 aaKnown RBP8.33□□□□□ -1.08
NDE1-202ENST00000396355 MBD2Q9UBB5 411 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 CDH9Q9ULB4 789 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 PCDHGB1Q9Y5G3 927 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 HRH3Q9Y5N1 445 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 CCDC154A6NI56 674 aa8.33□□□□□ -1.08
NDE1-202ENST00000396355 KHDRBS3O75525 346 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms