RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 RAB15P59190 212 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 NFE2L1Q14494 772 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 RPE65Q16518 533 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF658BQ4V348 819 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 LDLRAP1Q5SW96 308 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 TMEM220Q6QAJ8 160 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 PLXDC1Q8IUK5 500 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 CDKL3Q8IVW4 592 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 BEND7Q8N7W2 519 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 OR4K2Q8NGD2 314 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 OR13C4Q8NGS5 318 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF398Q8TD17 642 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 ANP32EQ9BTT0 268 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 LUC7LQ9NQ29 371 aaKnown RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 EPHA6Q9UF33 1036 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 FKBPLQ9UIM3 349 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 PACSIN2Q9UNF0 486 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 R3HDM2Q9Y2K5 976 aaKnown RBP15.86■□□□□ 0.13
CXCL12-206ENST00000395795 PCDHB11Q9Y5F2 797 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 LOC101059948A0A1B0GTJ6 334 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 B8ZZF3 427 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 TERTO14746 1132 aaKnown RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 STX7O15400 261 aaKnown RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 CAPN5O15484 640 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 LDB2O43679 373 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 KCNJ13O60928 360 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 PRAMEF1O95521 474 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF28P17035 718 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 LPOP22079 712 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 CAPZBP47756 277 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 GDF10P55107 478 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 SH3BP2P78314 561 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 SPARCL1Q14515 664 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 METRNLQ641Q3 311 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 ITPRIPL1Q6GPH6 555 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 PRSS42Q7Z5A4 293 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF605Q86T29 641 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 AMZ2Q86W34 360 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 CACNA2D3Q8IZS8 1091 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 LILRA3Q8N6C8 439 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 CCDC112Q8NEF3 446 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 GDAP1Q8TB36 358 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 SLC35B2Q8TB61 432 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 KLHL6Q8WZ60 621 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 TEFMQ96QE5 360 aaKnown RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 DESI2Q9BSY9 194 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 FSD1LQ9BXM9 530 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 RAB33BQ9H082 229 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF768Q9H5H4 540 aaKnown RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 WDR70Q9NW82 654 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 PKP3Q9Y446 797 aa15.85■□□□□ 0.13
CXCL12-206ENST00000395795 DNMT3AQ9Y6K1 912 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-206ENST00000395795 TLN1Q9Y490 2541 aaKnown RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 C5orf60A6NFR6 353 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 CCL22O00626 93 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 TOX3O15405 576 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 SRP72O76094 671 aaKnown RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 ZIC2O95409 532 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 METTL18O95568 372 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 FAM87AP0C7U9 286 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 ATP1A2P50993 1020 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 ITGA9Q13797 1035 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 DARS2Q6PI48 645 aaKnown RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 RNF31Q96EP0 1072 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 LINC00615Q96LM1 132 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 TGM7Q96PF1 710 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 INSM2Q96T92 566 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 BAG1Q99933 345 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-206ENST00000395795 STARD5Q9NSY2 213 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 IL17BQ9UHF5 180 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 PSMD13Q9UNM6 376 aa15.84■□□□□ 0.13
CXCL12-206ENST00000395795 TRBV5-4A0A0C4DH59 114 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 STK17BO94768 372 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 TJP3O95049 919 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 FTCDO95954 541 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 F8A1P23610 371 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 PSMA3P25788 255 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 CDKN1CP49918 316 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-206ENST00000395795 GTF2H3Q13889 308 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 BCL7AQ4VC05 210 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 FNBP1LQ5T0N5 605 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 CEACAM20Q6UY09 585 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 DET1Q7L5Y6 550 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 TRIM48Q8IWZ4 208 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 RBM12BQ8IXT5 1001 aaKnown RBP15.83■□□□□ 0.12
CXCL12-206ENST00000395795 UNC5BQ8IZJ1 945 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 NLGN4XQ8N0W4 816 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 NLGN4YQ8NFZ3 816 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-206ENST00000395795 HES6Q96HZ4 224 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 SLC45A3Q96JT2 553 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 C19orf43Q9BQ61 176 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 ZPBPQ9BS86 351 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 AAR2Q9Y312 384 aaKnown RBP15.83■□□□□ 0.12
CXCL12-206ENST00000395795 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
CXCL12-206ENST00000395795 IGLV3-16A0A075B6K0 115 aa15.82■□□□□ 0.12
CXCL12-206ENST00000395795 IGHV5-51A0A0C4DH38 117 aa15.82■□□□□ 0.12
CXCL12-206ENST00000395795 MACROD2A1Z1Q3 448 aa15.82■□□□□ 0.12
CXCL12-206ENST00000395795 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms