RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SUN2Q9UH99 717 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 PCDHGA11Q9Y5H2 935 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 SOAT2O75908 522 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 OR4F21O95013 312 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 MLYCDO95822 493 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 ALBP02768 609 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 SERPINF2P08697 491 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 PAX3P23760 479 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 SHMT2P34897 504 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 CDKN1CP49918 316 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 GRSF1Q12849 480 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 SELPLGQ14242 412 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 HID1Q8IV36 788 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 RBM12BQ8IXT5 1001 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 DCBLD1Q8N8Z6 715 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 PDPRQ8NCN5 879 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 OR4K2Q8NGD2 314 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 GPR152Q8TDT2 470 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 GIPC3Q8TF64 312 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 NSMCE2Q96MF7 247 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 MUS81Q96NY9 551 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 TUBA1CQ9BQE3 449 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 EIF2B4Q9UI10 523 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 ZSCAN9O15535 394 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 B4GAT1O43505 415 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 NDUFS3O75489 264 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 IMPDH2P12268 514 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 CDH1P12830 882 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 MATN1P21941 496 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 CCL23P55773 120 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 YBEYP58557 167 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 TLE2Q04725 743 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 PTPRNQ16849 979 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 ZNF829Q3KNS6 432 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 ANKRD26P1Q6NSI1 321 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 ZNF773Q6PK81 442 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 TXNDC11Q6PKC3 985 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 AFTPHQ6ULP2 937 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 FNDC5Q8NAU1 212 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 LEMD2Q8NC56 503 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 OR56A4Q8NGH8 313 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 OR13F1Q8NGS4 319 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 PNPT1Q8TCS8 783 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 BORCS5Q969J3 196 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 CNDP2Q96KP4 475 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 C8orf48Q96LL4 319 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 TBC1D23Q9NUY8 699 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 TMEM9Q9P0T7 183 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 PCDHB3Q9Y5E6 796 aa18.13■□□□□ 0.49
PCDHA1-202ENST00000394633 RANBP2P49792 3224 aaKnown RBP18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 SYNCRIPO60506 623 aaKnown RBP18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 TSPAN12O95859 305 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 NPPAP01160 153 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 BNIP3Q12983 259 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 BFSP2Q13515 415 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 DLEU7Q6UYE1 221 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 Q6ZSR9 355 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 GPRIN3Q6ZVF9 776 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 SLC24A5Q71RS6 500 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 ITIH5Q86UX2 942 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 DTWD1Q8N5C7 304 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 NKAPQ8N5F7 415 aaKnown RBP18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 CDYL2Q8N8U2 506 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 RIC8BQ9NVN3 520 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 MAGEL2Q9UJ55 1249 aa18.12■□□□□ 0.49
PCDHA1-202ENST00000394633 E2F3O00716 465 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 TCF3P15923 654 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MAPK10P53779 464 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 ARSFP54793 590 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 NAA20P61599 178 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 CRY1Q16526 586 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 ALG1LQ6GMV1 187 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 NADSYN1Q6IA69 706 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 ANKRD33Q7Z3H0 272 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 DPP10Q8N608 796 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 TTC9BQ8N6N2 239 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MDGA1Q8NFP4 955 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 TMBIM1Q969X1 311 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 ACDQ96AP0 544 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 CDK15Q96Q40 435 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 SMIM14Q96QK8 99 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 FANCEQ9HB96 536 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MARCH2Q9P0N8 246 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 NIPSNAP2O75323 286 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 PRSS23O95084 383 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 COL6A1P12109 1028 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 JUNBP17275 347 aaPredicted RBP18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MAPKAPK2P49137 400 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 ALDH3A2P51648 485 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MTPNP58546 118 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 NFATC3Q12968 1075 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 PRKG2Q13237 762 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 DAG1Q14118 895 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 SIDT2Q8NBJ9 832 aaKnown RBP18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 OR52B6Q8NGF0 335 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 NUDT8Q8WV74 236 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms