RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SYTL2Q9HCH5 934 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 OPTCQ9UBM4 332 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 CCDC154A6NI56 674 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 METTL15A6NJ78 407 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 H0Y626 953 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 AP3B1O00203 1094 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TRIM16O95361 564 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 PTPN3P26045 913 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TPD52P55327 224 aaPredicted RBP18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TPI1P60174 286 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 ISL1P61371 349 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 MVKQ03426 396 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 INTS6LQ5JSJ4 861 aaKnown RBP18.66■□□□□ 0.58
HOXC6-202ENST00000394331 CUZD1Q86UP6 607 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 FAM35AQ86V20 835 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 CLEC4FQ8N1N0 589 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 OR52K1Q8NGK4 314 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 BRI3BPQ8WY22 251 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 VPS35Q96QK1 796 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 B3GNT4Q9C0J1 378 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 GIMAP4Q9NUV9 329 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 VANGL2Q9ULK5 521 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TEX51A0A1B0GUA7 166 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 MTHFD1P11586 935 aaKnown RBP18.66■□□□□ 0.58
HOXC6-202ENST00000394331 MAP3K7CLP57077 242 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 SMAD1Q15797 465 aaKnown RBP18.66■□□□□ 0.58
HOXC6-202ENST00000394331 PYCR3Q53H96 274 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 PLD3Q8IV08 490 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TOR1AIP2Q8NFQ8 470 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 LGALS12Q96DT0 336 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 RNF170Q96K19 258 aa18.66■□□□□ 0.58
HOXC6-202ENST00000394331 TYW5A2RUC4 315 aaKnown RBP18.65■□□□□ 0.58
HOXC6-202ENST00000394331 NR5A2O00482 541 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 HTR1EP28566 365 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 OR3A3P47888 321 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 PRIM2P49643 509 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 PSEN2P49810 448 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 SYCE2Q6PIF2 218 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 HFE2Q6ZVN8 426 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 PSD4Q8NDX1 1056 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 TMBIM1Q969X1 311 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 BIRC7Q96CA5 298 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 AIFM2Q9BRQ8 373 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 TRMOQ9BU70 441 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 ULBP1Q9BZM6 244 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 CASS4Q9NQ75 786 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 TRHDEQ9UKU6 1024 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 CAPN3P20807 821 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 ST13P50502 369 aaKnown RBP18.65■□□□□ 0.58
HOXC6-202ENST00000394331 NCS1P62166 190 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 PIGFQ07326 219 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 SEMA3BQ13214 749 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 IRF5Q13568 498 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 DNAAF3Q8N9W5 541 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 KAT8Q9H7Z6 458 aaKnown RBP18.65■□□□□ 0.58
HOXC6-202ENST00000394331 ACOXLQ9NUZ1 547 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 FBXL12Q9NXK8 326 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 FBXW11Q9UKB1 542 aa18.65■□□□□ 0.58
HOXC6-202ENST00000394331 TREHO43280 583 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.58
HOXC6-202ENST00000394331 S100A5P33763 92 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 ABCG1P45844 678 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 DAOAP59103 153 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 RAB10P61026 200 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 ACAP2Q15057 778 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 UGT3A2Q3SY77 523 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 ZNF691Q5VV52 312 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 OTOP3Q7RTS5 596 aa18.64■□□□□ 0.58
HOXC6-202ENST00000394331 DCP1BQ8IZD4 617 aaKnown RBP18.64■□□□□ 0.58
HOXC6-202ENST00000394331 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.58
HOXC6-202ENST00000394331 YES1P07947 543 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 ALDOCP09972 364 aaKnown RBP18.64■□□□□ 0.57
HOXC6-202ENST00000394331 JUNDP17535 347 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 ETV6P41212 452 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 UGP2Q16851 508 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 PLEKHG6Q3KR16 790 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 CYHR1Q6ZMK1 362 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 TLK2Q86UE8 772 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 TP53INP2Q8IXH6 220 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 CELF2-AS1Q8N7Q2 184 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 DPF3Q92784 378 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 SDCCAG3Q96C92 435 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 PGAP3Q96FM1 320 aaPredicted RBP18.64■□□□□ 0.57
HOXC6-202ENST00000394331 PARK7Q99497 189 aaKnown RBP18.64■□□□□ 0.57
HOXC6-202ENST00000394331 VAT1Q99536 393 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 AMBRA1Q9C0C7 1298 aa18.64■□□□□ 0.57
HOXC6-202ENST00000394331 MAGED2Q9UNF1 606 aaPredicted RBP18.64■□□□□ 0.57
HOXC6-202ENST00000394331 A0A087X1B8 175 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 FAM72CH0Y354 149 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 HAS3O00219 553 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ARSAP15289 507 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 TCF3P15923 654 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 TAGLNQ01995 201 aaKnown RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 COLEC12Q5KU26 742 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 FAM72AQ5TYM5 149 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 FAM72DQ6L9T8 149 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms