RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 LINC00597Q9H2U6 94 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 BATF3Q9NR55 127 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 RASGRP1O95267 797 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 GGT5P36269 586 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 INPP1P49441 399 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 ZFP1Q6P2D0 407 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 DENND2DQ9H6A0 471 aaPredicted RBP16.31■□□□□ 0.2
SNX9-201ENST00000392185 EXOSC4Q9NPD3 245 aaKnown RBP16.31■□□□□ 0.2
SNX9-201ENST00000392185 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
SNX9-201ENST00000392185 MAGEA13PA6NCF6 341 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 SNUPNO95149 360 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 ANXA11P50995 505 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 HK2P52789 917 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 HMGCS1Q01581 520 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 NET1Q7Z628 596 aaPredicted RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 ANKRD46Q86W74 232 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 UTP15Q8TED0 518 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 AHCYL2Q96HN2 611 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 DNAJC28Q9NX36 388 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 C6orf203Q9P0P8 240 aaPredicted RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 IL36AQ9UHA7 158 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ZDHHC2Q9UIJ5 367 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 CFAP20Q9Y6A4 193 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 MT-ND1P03886 318 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 RAD23AP54725 363 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 DSC1Q08554 894 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ROGDIQ9GZN7 287 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ZDHHC3Q9NYG2 299 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ENTPD4Q9Y227 616 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 CLOCKO15516 846 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 FYNP06241 537 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 PRSS56P0CW18 603 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 FCGR1AP12314 374 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 IDSP22304 550 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 AQP1P29972 269 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 SLC16A1P53985 500 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 CPSF7Q8N684 471 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 OR9Q1Q8NGQ5 310 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 PRKAB1Q9Y478 270 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 TAF1LQ8IZX4 1826 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 HS6ST1O60243 411 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 CTGFP29279 349 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ZCCHC8Q6NZY4 707 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 KHSRPQ92945 711 aaKnown RBP eCLIP16.3■□□□□ 0.25e-7■■■□□ 15.4
SNX9-201ENST00000392185 CEP19Q96LK0 163 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 ZNF184Q99676 751 aaPredicted RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 CCDC28BQ9BUN5 200 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 TFB2MQ9H5Q4 396 aaKnown RBP16.3■□□□□ 0.2
SNX9-201ENST00000392185 SLC27A6Q9Y2P4 619 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
SNX9-201ENST00000392185 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 NPHS1O60500 1241 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 LEFTY1O75610 366 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 CD70P32970 193 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 HSPA13P48723 471 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 NAA20P61599 178 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 LACTB2Q53H82 288 aaPredicted RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 GALNT13Q8IUC8 556 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ZC3H7AQ8IWR0 971 aaKnown RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 CLIP3Q96DZ5 547 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 RTKNQ9BST9 563 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 CADM1Q9BY67 442 aaKnown RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 SCN3BQ9NY72 215 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 IFNA14P01570 189 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 UROSP10746 265 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 SSR2P43308 183 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 PCLAFQ15004 111 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 ABTB1Q969K4 478 aaPredicted RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 THAP11Q96EK4 314 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 EBPLQ9BY08 206 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 SOHLH2Q9NX45 425 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 PRDM4Q9UKN5 801 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 TM7SF2O76062 418 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ANPEPP15144 967 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 IMPDH1P20839 514 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ADAM17P78536 824 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 TCEAL8Q8IYN2 117 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ACTRT2Q8TDY3 377 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 QRFPRQ96P65 431 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 KXD1Q9BQD3 176 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
SNX9-201ENST00000392185 ATAD3AQ9NVI7 634 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 ELOVL2Q9NXB9 296 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 GIMAP2Q9UG22 337 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 LRCH1Q9Y2L9 728 aa16.29■□□□□ 0.2
SNX9-201ENST00000392185 UPK3BL1B0FP48 263 aa16.28■□□□□ 0.2
SNX9-201ENST00000392185 UPK3BL2E5RIL1 263 aa16.28■□□□□ 0.2
SNX9-201ENST00000392185 ACP5P13686 325 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms