RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 IGFBP4P22692 258 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 MYF6P23409 242 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 RARRES1P49788 294 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 EFNA5P52803 228 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 NRG3P56975 720 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 ATP6V0D1P61421 351 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 ECT2LQ008S8 904 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 TCP10Q12799 353 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 KCNJ11Q14654 390 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 SETMARQ53H47 684 aaPredicted RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 SGO1Q5FBB7 561 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 SPANXN2Q5MJ10 180 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 YOD1Q5VVQ6 348 aaPredicted RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 IL23RQ5VWK5 629 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 SULT1C3Q6IMI6 304 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 OGFOD2Q6N063 350 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PIWIL4Q7Z3Z4 852 aaKnown RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 PLEKHH3Q7Z736 793 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PROSER1Q86XN7 944 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 WDR49Q8IV35 697 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 LINC00116Q8NCU8 138 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PIK3C3Q8NEB9 887 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 KBTBD8Q8NFY9 601 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 OR9Q1Q8NGQ5 310 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 MAGEE2Q8TD90 523 aaPredicted RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 ST8SIA4Q92187 359 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 COQ8BQ96D53 544 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PPM1MQ96MI6 270 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 IL22Q9GZX6 179 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PIGUQ9H490 435 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 RPF1Q9H9Y2 349 aaKnown RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 CPNE5Q9HCH3 593 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 SNX15Q9NRS6 342 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 ZCCHC3Q9NUD5 404 aaKnown RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 HSFX1Q9UBD0 423 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 EBF1Q9UH73 591 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 STOML2Q9UJZ1 356 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 RIMKLBQ9ULI2 386 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 TBC1D30Q9Y2I9 924 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 AP3M1Q9Y2T2 418 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 PCDHGA10Q9Y5H3 936 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 KIF13BQ9NQT8 1826 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 ANKRD36CQ5JPF3 1778 aa5.67□□□□□ -1.5
RFC1-202ENST00000381897 COL5A2P05997 1499 aaPredicted RBP5.67□□□□□ -1.5
RFC1-202ENST00000381897 LOC100506127A0A0U1RQW1 187 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 DCDC2BA2VCK2 349 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 PSMD11O00231 422 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 FAM155BO75949 473 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SERPIND1P05546 499 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 FHP07954 510 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 TFPTP0C1Z6 253 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 DCKP27707 260 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 GRIA4P48058 902 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 IST1P53990 364 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SP4Q02446 784 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 MMRN1Q13201 1228 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 RAB39AQ14964 217 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 USP41Q3LFD5 358 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 Q3ZCU0 254 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 PLA2G4FQ68DD2 849 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 FBXO42Q6P3S6 717 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 MZT2AQ6P582 158 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 RNF19BQ6ZMZ0 732 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 TMCO2Q7Z6W1 182 aaPredicted RBP5.66□□□□□ -1.5
RFC1-202ENST00000381897 CPNE8Q86YQ8 564 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 FIBCD1Q8N539 461 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 ZNF419Q96HQ0 510 aaPredicted RBP5.66□□□□□ -1.5
RFC1-202ENST00000381897 CXorf58Q96LI9 332 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SPSB2Q99619 263 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SH2D3AQ9BRG2 576 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SDCBP2Q9H190 292 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 ARHGEF4Q9NR80 690 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 TOR4AQ9NXH8 423 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 GDAP2Q9NXN4 497 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 RAPGEFL1Q9UHV5 662 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 RIMS3Q9UJD0 308 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 CDH7Q9ULB5 785 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.66□□□□□ -1.5
RFC1-202ENST00000381897 BTBD3Q9Y2F9 522 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 SLC27A5Q9Y2P5 690 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 IFT52Q9Y366 437 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 NR5A2O00482 541 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 INPP4BO15327 924 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 WDR47O94967 919 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 NDUFB10O96000 172 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 CD72P21854 359 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 KELP23276 732 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 DNAJB1P25685 340 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 PBLDP30039 288 aaPredicted RBP5.66□□□□□ -1.5
RFC1-202ENST00000381897 MIPP30301 263 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
RFC1-202ENST00000381897 CDH8P55286 799 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 GNG2P59768 71 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 POU4F1Q01851 419 aa5.66□□□□□ -1.5
RFC1-202ENST00000381897 CSTF3Q12996 717 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms