RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 KRT222Q8N1A0 295 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 CCL4L1Q8NHW4 92 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 MRRFQ96E11 262 aaKnown RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 LINC00615Q96LM1 132 aaPredicted RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 LRRC61Q9BV99 259 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 TRNAU1APQ9NX07 287 aaKnown RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 GULP1Q9UBP9 304 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 GNPTGQ9UJJ9 305 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 H3BM21 787 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 QSOX1O00391 747 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 SDC3O75056 442 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 NIPSNAP2O75323 286 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 ERLIN1O75477 346 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 PIAS2O75928 621 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 CER1O95813 267 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 SHBGP04278 402 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 ACP5P13686 325 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 CTSEP14091 401 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 ITGB6P18564 788 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 PBLDP30039 288 aaPredicted RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 GP5P40197 560 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 ARRB1P49407 418 aaPredicted RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 CSE1LP55060 971 aaKnown RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 HNRNPKP61978 463 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMN2-202ENST00000380742 IL9RQ01113 521 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 CTBSQ01459 385 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 C1orf61Q13536 156 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 KLHL38Q2WGJ6 581 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 RBM20Q5T481 1227 aaKnown RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 NRROSQ86YC3 692 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 ATXN7L3BQ96GX2 97 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 NDNQ99608 321 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 RBBP8Q99708 897 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 CCM2Q9BSQ5 444 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 AARSD1Q9BTE6 412 aaKnown RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
SMN2-202ENST00000380742 DNMT3AQ9Y6K1 912 aaPredicted RBP18.49■□□□□ 0.55
SMN2-202ENST00000380742 EXOC1LA0A1B0GW35 172 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 POC1B-GALNT4F8VUJ3 575 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 DFNA5O60443 496 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 AK4P27144 223 aaPredicted RBP18.48■□□□□ 0.55
SMN2-202ENST00000380742 GCAP28676 217 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 INSCQ1MX18 579 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 ZNF658BQ4V348 819 aaPredicted RBP18.48■□□□□ 0.55
SMN2-202ENST00000380742 BEND6Q5SZJ8 279 aaPredicted RBP18.48■□□□□ 0.55
SMN2-202ENST00000380742 GRTP1Q5TC63 336 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 XKR5Q6UX68 686 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 AMZ2Q86W34 360 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 MINDY1Q8N5J2 469 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 ZNF548Q8NEK5 533 aaPredicted RBP18.48■□□□□ 0.55
SMN2-202ENST00000380742 ACVR1CQ8NER5 493 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 GPBAR1Q8TDU6 330 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 HNRNPLLQ8WVV9 542 aaKnown RBP18.48■□□□□ 0.55
SMN2-202ENST00000380742 SLC44A1Q8WWI5 657 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 PAFAH2Q99487 392 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 TIMM29Q9BSF4 260 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 RHOJQ9H4E5 214 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 RXFP3Q9NSD7 469 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 UCKL1Q9NWZ5 548 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 TXNDC16Q9P2K2 825 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 GALPQ9UBC7 116 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 SPASTQ9UBP0 616 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 KCNK6Q9Y257 313 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 CABIN1Q9Y6J0 2220 aa18.48■□□□□ 0.55
SMN2-202ENST00000380742 MGAT4DA6NG13 374 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 PRR19A6NJB7 356 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 TRIM16O95361 564 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 FTH1P02794 183 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 DGKAP23743 735 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 EPHA8P29322 1005 aaPredicted RBP18.47■□□□□ 0.55
SMN2-202ENST00000380742 ARHGAP8P85298 464 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 TIAL1Q01085 375 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMN2-202ENST00000380742 NAPRTQ6XQN6 538 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 FAM83HQ6ZRV2 1179 aaPredicted RBP18.47■□□□□ 0.55
SMN2-202ENST00000380742 KANSL1Q7Z3B3 1105 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 SPNS2Q8IVW8 549 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 SLC25A45Q8N413 288 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 OR2L2Q8NH16 312 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 LMX1AQ8TE12 382 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 FAM136AQ96C01 138 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 VPS39Q96JC1 886 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 CCDC68Q9H2F9 335 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 KLC4Q9NSK0 619 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 FAM8A1Q9UBU6 413 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 CORO1CQ9ULV4 474 aaPredicted RBP18.47■□□□□ 0.55
SMN2-202ENST00000380742 DNAJC16Q9Y2G8 782 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 MTO1Q9Y2Z2 717 aaKnown RBP18.47■□□□□ 0.55
SMN2-202ENST00000380742 COMMD10Q9Y6G5 202 aa18.47■□□□□ 0.55
SMN2-202ENST00000380742 C17orf113A0A1B0GUU1 675 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 F8W8V4 182 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 H3BMM5 538 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 AQP9O43315 295 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 NUDT17P0C025 328 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 CHRM3P20309 590 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 CCR7P32248 378 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 MSH2P43246 934 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 CCT8P50990 548 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 ATXN3P54252 364 aaPredicted RBP18.46■□□□□ 0.55
SMN2-202ENST00000380742 CDKN2DP55273 166 aa18.46■□□□□ 0.55
SMN2-202ENST00000380742 DMPKQ09013 629 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms