RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PSMA8Q8TAA3 256 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 NELL1Q92832 810 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 Q96MT0 163 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 SYT11Q9BT88 431 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 DNAJC11Q9NVH1 559 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 FKBPLQ9UIM3 349 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 CNTN6Q9UQ52 1028 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 SQORQ9Y6N5 450 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 FAM149AA5PLN7 773 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ERAL1O75616 437 aaKnown RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 SLC26A3P40879 764 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 USP46P62068 366 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 GPR107Q5VW38 600 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 CAND1Q86VP6 1230 aaKnown RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 PPM1MQ96MI6 270 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 HOPXQ9BPY8 73 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 SOHLH2Q9NX45 425 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 RAPGEFL1Q9UHV5 662 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 KLF11O14901 512 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 SLC9A5Q14940 896 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 FBXL22Q6P050 247 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 B3GNT9Q6UX72 402 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ARHGAP36Q6ZRI8 547 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 TSSK3Q96PN8 268 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 OR52B2Q96RD2 323 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 POLR3HQ9Y535 204 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 YIPF1Q9Y548 306 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 GMPPBQ9Y5P6 360 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CCDC88AQ3V6T2 1871 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 MT-ND1P03886 318 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 RPIAP49247 311 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 MLLT6P55198 1093 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CYP4F8P98187 520 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CAP1Q01518 475 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 FCHO2Q0JRZ9 810 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ALFQ53S48 1182 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 REP15Q6BDI9 236 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PSRC1Q6PGN9 363 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PAOXQ6QHF9 649 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 TRIM39Q9HCM9 518 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 KLHL1Q9NR64 748 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 GTF2A1LQ9UNN4 478 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PSAT1Q9Y617 370 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 MYH3P11055 1940 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ESR1P03372 595 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 RFTN1Q14699 578 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PITRM1Q5JRX3 1037 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 SERPINA9Q86WD7 417 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ITCHQ96J02 903 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF570Q96NI8 536 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 AARSD1Q9BTE6 412 aaKnown RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PPM1HQ9ULR3 514 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CORO2BQ9UQ03 480 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 HAT1O14929 419 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 RNASEH2AO75792 299 aaKnown RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 NUDT14O95848 222 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 EDNRBP24530 442 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 SPATA19Q7Z5L4 167 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ANKRD49Q8WVL7 239 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 ACDQ96AP0 544 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 HBEGFQ99075 208 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 IPPKQ9H8X2 491 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 RMI1Q9H9A7 625 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 PNPLA8Q9NP80 782 aa14.87□□□□□ -0.03
NPHP4-201ENST00000378156 BBIP1A8MTZ0 92 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 KLHL18O94889 574 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ITGAXP20702 1163 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 PTGER3P43115 390 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 NDUFAF6Q330K2 333 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ATXN7L2Q5T6C5 722 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 KRT77Q7Z794 578 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 LRRC17Q8N6Y2 441 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 OR2T34Q8NGX1 318 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 OR2T3Q8NH03 318 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 SPACA7Q96KW9 195 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 APOLD1Q96LR9 279 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF490Q9ULM2 529 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CST1P01037 141 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 GTF2E2P29084 291 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 DGKGP49619 791 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 LPIN1Q14693 890 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 ATG14Q6ZNE5 492 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 RALGPS2Q86X27 583 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 GMEB1Q9Y692 573 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 A0A1W2PRU2 124 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 OR2AG2A6NM03 316 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 PSMD8P48556 350 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 IDH2P48735 452 aaKnown RBP14.86□□□□□ -0.03
NPHP4-201ENST00000378156 LCP2Q13094 533 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 NAE1Q13564 534 aa14.86□□□□□ -0.03
NPHP4-201ENST00000378156 CHSY3Q70JA7 882 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms