RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GLYATQ6IB77 296 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM175Q9BSA9 504 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ALG2Q9H553 416 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 NDUFAF6Q330K2 333 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 KLHL6Q8WZ60 621 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GMLQ99445 158 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ZSCAN5AQ9BUG6 496 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CYP2B6P20813 491 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GLDCP23378 1020 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 NUMBP49757 651 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ZBED6CLQ96FA7 236 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ERMAPQ96PL5 475 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OR52E6Q96RD3 313 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 WDR27A2RRH5 827 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DGKIO75912 1065 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RNF144AP50876 292 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 HMGCS2P54868 508 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 LINGO4Q6UY18 593 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DLGAP1O14490 977 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 IKBKEQ14164 716 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C10orf120Q5SQS8 335 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 VASH1Q7L8A9 365 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PCDH19Q8TAB3 1148 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC6A7Q99884 636 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SPON2Q9BUD6 331 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C1QTNF3Q9BXJ4 246 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CLDN24A6NM45 220 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FPGTO14772 594 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RAD17O75943 681 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ABATP80404 500 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GALNT4Q8N4A0 578 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GLMNQ92990 594 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 NAP1L6A6NFF2 107 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RYBPQ8N488 228 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC2A13Q96QE2 648 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM168Q9H0V1 697 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PIGUQ9H490 435 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM14AQ9Y6G1 99 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 E5RJQ4 531 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC16A6O15403 523 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 HMGA1P17096 107 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 MAP2K6P52564 334 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SPCS2Q15005 226 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 LARS2Q15031 903 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DEPDC1Q5TB30 811 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TIGD3Q6B0B8 471 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMC5Q6UXY8 1006 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DEFB106AQ8N104 65 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FSTL5Q8N475 847 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C1orf127Q8N9H9 656 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 GATA5Q9BWX5 397 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 KLHL25Q9H0H3 589 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 AGO3Q9H9G7 860 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OLAHQ9NV23 265 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ARRDC5A6NEK1 342 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CACNB1Q02641 598 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C3P1Q6ZMU1 363 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FCRL2Q96LA5 508 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 AGAP3Q96P47 875 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 WDR55Q9H6Y2 383 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 DUOX1Q9NRD9 1551 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 UBE2QL1A1L167 161 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC15A1P46059 708 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PFKFB4Q16877 469 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OOSP2Q86WS3 158 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SENP8Q96LD8 212 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 EVA1BQ9NVM1 165 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TSFMP43897 325 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CCNJQ5T5M9 372 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 KIAA1614Q5VZ46 1190 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC107Q8WV48 283 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 C17orf50Q8WW18 174 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 UHRF1Q96T88 793 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 AOC2O75106 756 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ZMPSTE24O75844 475 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ATF6P18850 670 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PAX7P23759 505 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ILF3Q12906 894 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC7A13Q8TCU3 470 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC2A12Q8TD20 617 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 HS6ST2Q96MM7 605 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 SLC27A6Q9Y2P4 619 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FAM95CA0A1B0GW59 222 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PLCL1Q15111 1095 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 RNLSQ5VYX0 342 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 OR52E8Q6IFG1 317 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 LRRC56Q8IYG6 542 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 AIF1LQ9BQI0 150 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 K7EPI3 171 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 POU3F3P20264 500 aaPredicted RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PIWIL3Q7Z3Z3 882 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 TMPRSS11BQ86T26 416 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 CHERPQ8IWX8 916 aaKnown RBP4.88□□□□□ -1.63
PCDH9-201ENST00000377861 IL12RB2Q99665 862 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 MEPEQ9NQ76 525 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms