RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 STT3AP46977 705 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 GALK1P51570 392 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 IST1P53990 364 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 RPL38P63173 70 aaKnown RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 HMGCS1Q01581 520 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 ABRAXAS2Q15018 415 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 AP5B1Q2VPB7 878 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 HECTD3Q5T447 861 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 GLYATQ6IB77 296 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 KIAA1841Q6NSI8 718 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 PEX13Q92968 403 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 TTPALQ9BTX7 342 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 FARSBQ9NSD9 589 aaKnown RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 TMEM161AQ9NX61 479 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 AFF4Q9UHB7 1163 aaKnown RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 CDK4P11802 303 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 SLC2A4P14672 509 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 HMOX2P30519 316 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 ZFP36L2P47974 494 aaKnown RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 PRKG2Q13237 762 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 TMED1Q13445 227 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 SPATA19Q7Z5L4 167 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 FBXO30Q8TB52 745 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 ABTB1Q969K4 478 aaPredicted RBP16.04■□□□□ 0.16
TRIM27-202ENST00000377199 EID2BQ96D98 161 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 C17orf80Q9BSJ5 609 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 IPPKQ9H8X2 491 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 PREBQ9HCU5 417 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 HSFX1Q9UBD0 423 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 ANGPTL3Q9Y5C1 460 aa16.04■□□□□ 0.16
TRIM27-202ENST00000377199 PFDN6O15212 129 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 CA12O43570 354 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 TBL1XO60907 577 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 CLDN11O75508 207 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 CR2P20023 1033 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 ESRRGP62508 458 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 USP41Q3LFD5 358 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 FAM26DQ5JW98 314 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 MBOAT1Q6ZNC8 495 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 GOLGA7Q7Z5G4 137 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 NAT16Q8N8M0 369 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 DUS3LQ96G46 650 aaKnown RBP16.03■□□□□ 0.16
TRIM27-202ENST00000377199 RHBDL2Q9NX52 303 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 ATXN10Q9UBB4 475 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 ZNF840PA6NDX5 716 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 NBNO60934 754 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 VPS4BO75351 444 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 LDLRP01130 860 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 HRH2P25021 359 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 LAPTM5Q13571 262 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 GPR107Q5VW38 600 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 DHRSXQ8N5I4 330 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 OR10Q1Q8NGQ4 319 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 LKAAEAR1Q8TD35 194 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 NSMCE2Q96MF7 247 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 CASD1Q96PB1 797 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
TRIM27-202ENST00000377199 PRM3Q9NNZ6 103 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 TET1Q8NFU7 2136 aa16.03■□□□□ 0.16
TRIM27-202ENST00000377199 H0YJX3 145 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 ACOX3O15254 700 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SLC10A3P09131 477 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 RFC2P35250 354 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 RPS9P46781 194 aaKnown RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SH3BGRP55822 239 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 TNK2Q07912 1038 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 TMEM259Q4ZIN3 620 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SLC44A4Q53GD3 710 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 XKR7Q5GH72 579 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 CYP20A1Q6UW02 462 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 LRRC8DQ7L1W4 858 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 MILR1Q7Z6M3 343 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 CLEC4FQ8N1N0 589 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 LATS2Q9NRM7 1088 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 STX16O14662 325 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 EEDO75530 441 aaKnown RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 PRAMEF1O95521 474 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 GALTP07902 379 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 ATP6AP1Q15904 470 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 ADRM1Q16186 407 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 TMTC4Q5T4D3 741 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SKA2Q8WVK7 121 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SCLYQ96I15 445 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 SMPD3Q9NY59 655 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-202ENST00000377199 HACD3Q9P035 362 aa16.02■□□□□ 0.16
TRIM27-202ENST00000377199 A0A1B0GVM2 712 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 GPIP06744 558 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 VARSP26640 1264 aaKnown RBP16.02■□□□□ 0.15
TRIM27-202ENST00000377199 ELK4P28324 431 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 FAM189BP81408 668 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 SREBF2Q12772 1141 aa16.02■□□□□ 0.15
TRIM27-202ENST00000377199 GTF2H2Q13888 395 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms