RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PRLHRP49683 370 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 DRG2P55039 364 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TARDBPQ13148 414 aaKnown RBP eCLIP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 NFE2L1Q14494 772 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 KIR2DS5Q14953 304 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SEPT7Q16181 437 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 AGAP9Q5VTM2 703 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 LYPLAL1Q5VWZ2 237 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 HOOK3Q86VS8 718 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CCNJLQ8IV13 435 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 OR2L2Q8NH16 312 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF592Q92610 1267 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TRIM56Q9BRZ2 755 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TRIM31Q9BZY9 425 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 LRRN3Q9H3W5 708 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CATSPERZQ9NTU4 200 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SAMD15Q9P1V8 674 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MARCH4Q9P2E8 410 aaPredicted RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 WDR37Q9Y2I8 494 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 GOLGA4Q13439 2230 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FAM237BA0A1B0GVD1 139 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CD3EAPO15446 510 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 OR1I1O60431 355 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 AP2A2O94973 939 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 VAPBO95292 243 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TUBB4AP04350 444 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RPLP0P05388 317 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 HOXB3P14651 431 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 BRAFP15056 766 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 NSG1P42857 185 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 OR1D5P58170 312 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 NR1D2Q14995 579 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 METRNLQ641Q3 311 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 XKR5Q6UX68 686 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PACS1Q6VY07 963 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CERS6Q6ZMG9 384 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF572Q7Z3I7 529 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SPRED1Q7Z699 444 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 LDB1Q86U70 411 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SLC9B2Q86UD5 537 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 DCBLD1Q8N8Z6 715 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 WDR48Q8TAF3 677 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FCRL3Q96P31 734 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TTC1Q99614 292 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SYNDIG1Q9H7V2 258 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SARS2Q9NP81 518 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF624Q9P2J8 865 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CPNE7Q9UBL6 633 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ANAPC5Q9UJX4 755 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZMIZ1Q9ULJ6 1067 aa20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF106Q9H2Y7 1883 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FAM187AA6NFU0 413 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 EFCAB8A8MWE9 144 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 C1QTNF9BB2RNN3 333 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RAD51CO43502 376 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 C1QTNF9P0C862 333 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 XRCC1P18887 633 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ALDH4A1P30038 563 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SLC19A1P41440 591 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ARCN1P48444 511 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 HHEXQ03014 270 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CLCA4Q14CN2 919 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MORF4L2Q15014 288 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ANKRD20A4Q4UJ75 823 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 KIAA0930Q6ICG6 404 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 HIBCHQ6NVY1 386 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF761Q86XN6 746 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CFAP206Q8IYR0 622 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SNF8Q96H20 258 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CCM2Q9BSQ5 444 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FAM8A1Q9UBU6 413 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SNX24Q9Y343 169 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MAD1L1Q9Y6D9 718 aa20.59■□□□□ 0.89
MAP1LC3A-202ENST00000374837 C17orf113A0A1B0GUU1 675 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 KLHL33A6NCF5 533 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TCEA3O75764 348 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SEC31AO94979 1220 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PPARGP37231 505 aaPredicted RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 GPR3P46089 330 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ITGA8P53708 1063 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 UBE2IP63279 158 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CAMK2BQ13554 666 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SPIDRQ14159 915 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MSS51Q4VC12 460 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 AARS2Q5JTZ9 985 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RBM44Q6ZP01 1051 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MAATS1Q7Z4T9 603 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TMEM135Q86UB9 458 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 LILRA3Q8N6C8 439 aaPredicted RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF669Q96BR6 464 aaPredicted RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 DEPDC7Q96QD5 511 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 GFM1Q96RP9 751 aaKnown RBP20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PSMD13Q9UNM6 376 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RPS6KL1Q9Y6S9 549 aa20.58■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PLXNB3Q9ULL4 1909 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OR52A4PA6NMU1 304 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GOLGA8KD6RF30 607 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GOLGA8TH3BQL2 631 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 KIF2AO00139 706 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms