RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 HID1Q8IV36 788 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 DENND6AQ8IWF6 608 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 FBXL6Q8N531 539 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 AMER2Q8N7J2 671 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 GTF2H4Q92759 462 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
PRPF4-201ENST00000374198 WBP1LQ9NX94 342 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 MAGEL2Q9UJ55 1249 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 CPSF3Q9UKF6 684 aaKnown RBP12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 MKLN1Q9UL63 735 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TEX51A0A1B0GUA7 166 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.36
PRPF4-201ENST00000374198 ASPDHA6ND91 283 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 OR5K3A6NET4 321 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 EEF2KO00418 725 aaKnown RBP12.77□□□□□ -0.36
PRPF4-201ENST00000374198 SLC16A6O15403 523 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 GSTM1P09488 218 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 DBTP11182 482 aaKnown RBP12.77□□□□□ -0.36
PRPF4-201ENST00000374198 IL7P13232 177 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 ARL2P36404 184 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 MVKQ03426 396 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 CTBP1Q13363 440 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 LRRC26Q2I0M4 334 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 ESCO2Q56NI9 601 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 PAGE3Q5JUK9 113 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 KCTD11Q693B1 232 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 ZPBP2Q6X784 338 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 BRSK1Q8TDC3 778 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 TRMOQ9BU70 441 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 CDADC1Q9BWV3 514 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 CHST12Q9NRB3 414 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 DNAJB9Q9UBS3 223 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 PTGDR2Q9Y5Y4 395 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 CSADQ9Y600 493 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 NRCAMQ92823 1304 aa12.77□□□□□ -0.36
PRPF4-201ENST00000374198 PDHXO00330 501 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 BCKDKO14874 412 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 HS6ST1O60243 411 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 ZNF780AO75290 641 aaPredicted RBP12.77□□□□□ -0.37
PRPF4-201ENST00000374198 PGLSO95336 258 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 SP4Q02446 784 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 RAPSNQ13702 412 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.37
PRPF4-201ENST00000374198 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 LCLAT1Q6UWP7 414 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 RAB43Q86YS6 212 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 RNF135Q8IUD6 432 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 PHYKPLQ8IUZ5 450 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 APPL2Q8NEU8 664 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 TSPEARQ8WU66 669 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 SEPT1Q8WYJ6 367 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 ELMO1Q92556 727 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 FEM1BQ9UK73 627 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.37
PRPF4-201ENST00000374198 DSCR3O14972 297 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CPNE3O75131 537 aaKnown RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SUPT7LO94864 414 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CES1P23141 567 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SLC15A1P46059 708 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 BCAT1P54687 386 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 RAD51Q06609 339 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 XKR3Q5GH77 459 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CCNJQ5T5M9 372 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 PXDC1Q5TGL8 231 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SPESP1Q6UW49 350 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SLC22A9Q8IVM8 553 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 POLR3BQ9NW08 1133 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SCN3BQ9NY72 215 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 MAT2BQ9NZL9 334 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SLAMF8Q9P0V8 285 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 POLHQ9Y253 713 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 AIREO43918 545 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 B4GALT4O60513 344 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CST1P01037 141 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CYP11A1P05108 521 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 ITGA2P17301 1181 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 ITGB6P18564 788 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 PTPN3P26045 913 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 KCNK10P57789 538 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 EMX2Q04743 252 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms