RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TMEM209Q96SK2 561 aa10.5□□□□□ -0.73
PGK1-201ENST00000373316 TUBA1CQ9BQE3 449 aa10.5□□□□□ -0.73
PGK1-201ENST00000373316 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TYROBPO43914 113 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SMNDC1O75940 238 aaKnown RBP eCLIP10.49□□□□□ -0.731e-51■■■□□ 17.7
PGK1-201ENST00000373316 TMEM63AO94886 807 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 LATS1O95835 1130 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 C8BP07358 591 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CRADDP78560 199 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 GALNT1Q10472 559 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 GTF2H2Q13888 395 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 FNDC3BQ53EP0 1204 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 TYW3Q6IPR3 259 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 GTF2H2CQ6P1K8 395 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CXCL17Q6UXB2 119 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CXXC5Q7LFL8 322 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 LENG8Q96PV6 779 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 BCL7BQ9BQE9 202 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TXLNGYQ9BZA5 131 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 IL1RAPQ9NPH3 570 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 C1orf109Q9NX04 203 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 PRORSD1PA6NEY8 169 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 FAM155AB1AL88 458 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 AP3D1O14617 1153 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 ECDO95905 644 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 AGR2O95994 175 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 HPRP00739 348 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 IGFBP6P24592 240 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 HNF4AP41235 474 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CLK3P49761 638 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 PRKCZQ05513 592 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 NOGQ13253 232 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SLC14A2Q15849 920 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 AP5B1Q2VPB7 878 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SNX20Q7Z614 316 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 FSTL5Q8N475 847 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 DNAJB14Q8TBM8 379 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 STON2Q8WXE9 905 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 AZIN2Q96A70 460 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CAMK1GQ96NX5 476 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 VPS35Q96QK1 796 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 ZDHHC6Q9H6R6 413 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 PRKAG3Q9UGI9 489 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SCML2Q9UQR0 700 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SLC27A6Q9Y2P4 619 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 PCDHGA11Q9Y5H2 935 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 HEBP2Q9Y5Z4 205 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TSPAN3O60637 253 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 MYL9P24844 172 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 ABL2P42684 1182 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SCAPQ12770 1279 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 USP4Q13107 963 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 SEMA3AQ14563 771 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 QPRTQ15274 297 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 PAN2Q504Q3 1202 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 FAM220AQ7Z4H9 259 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 DENND1CQ8IV53 801 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 RIT1Q92963 219 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TP53INP1Q96A56 240 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 HTATIP2Q9BUP3 242 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 DERL2Q9GZP9 239 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 DDX18Q9NVP1 670 aaKnown RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 TBCCD1Q9NVR7 557 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 POLR3HQ9Y535 204 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 BCKDKO14874 412 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 TREHO43280 583 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 PRMT3O60678 531 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CDH3P22223 829 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 IGFBP5P24593 272 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 USP46P62068 366 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 GCNT7Q6ZNI0 430 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 NPAS4Q8IUM7 802 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 FAM47BQ8NA70 645 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 RFKQ969G6 155 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 FNDC11Q9BVV2 318 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 ZNF490Q9ULM2 529 aaPredicted RBP10.49□□□□□ -0.73
PGK1-201ENST00000373316 SNX8Q9Y5X2 465 aa10.49□□□□□ -0.73
PGK1-201ENST00000373316 CCDC182A6NF36 153 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 LINC00032P0C843 101 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 TUBA1BP68363 451 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 STX4Q12846 297 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 FASTKD3Q14CZ7 662 aaKnown RBP10.48□□□□□ -0.73
PGK1-201ENST00000373316 METTL2BQ6P1Q9 378 aaKnown RBP10.48□□□□□ -0.73
PGK1-201ENST00000373316 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 TMPRSS11AQ6ZMR5 421 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 GK5Q6ZS86 529 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 TUBA1AQ71U36 451 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 HID1Q8IV36 788 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 SCML4Q8N228 414 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 C15orf40Q8WUR7 153 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 CHRAC1Q9NRG0 131 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 C9IYK1 514 aa10.48□□□□□ -0.73
PGK1-201ENST00000373316 MRPS14O60783 128 aaKnown RBP10.48□□□□□ -0.73
PGK1-201ENST00000373316 BCAS2O75934 225 aaPredicted RBP10.48□□□□□ -0.73
PGK1-201ENST00000373316 TIE1P35590 1138 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms