RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
SDC4-201ENST00000372733 FNIP2Q9P278 1114 aa16.2■□□□□ 0.18
SDC4-201ENST00000372733 PTPRDP23468 1912 aa16.2■□□□□ 0.18
SDC4-201ENST00000372733 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
SDC4-201ENST00000372733 HLA-DPA1P20036 260 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 AGXTP21549 392 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 CDKN1CP49918 316 aaPredicted RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 HK3P52790 923 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 TSPY1Q01534 308 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 CHRNB3Q05901 458 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 ATP6AP1LQ52LC2 224 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 RBM48Q5RL73 367 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 SLC16A12Q6ZSM3 486 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 RBM23Q86U06 439 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 FIG4Q92562 907 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 CDKN2AIPNLQ96HQ2 116 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 SMIM14Q96QK8 99 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 CGREF1Q99674 301 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 TDRD1Q9BXT4 1180 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 ACTL8Q9H568 366 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 EXD2Q9NVH0 621 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 NEUROG3Q9Y4Z2 214 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 SPO11Q9Y5K1 396 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 CEP350Q5VT06 3117 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 NLRC5Q86WI3 1866 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 BCAS1O75363 584 aaPredicted RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 CYP11A1P05108 521 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 HTR1BP28222 390 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 GPR15P49685 360 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 MRPS6P82932 125 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 DPY19L1Q2PZI1 675 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 Q6ZSR9 355 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 EFL1Q7Z2Z2 1120 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 ZDHHC13Q8IUH4 622 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 DPP10Q8N608 796 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 OR56A4Q8NGH8 313 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 BRSK1Q8TDC3 778 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 HDAC2Q92769 488 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 FATE1Q969F0 183 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 FKBP10Q96AY3 582 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 FAM118AQ9NWS6 357 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 TSR3Q9UJK0 312 aaKnown RBP16.19■□□□□ 0.18
SDC4-201ENST00000372733 TLR6Q9Y2C9 796 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 ACTL7AQ9Y615 435 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 ANKRD36A6QL64 1941 aa16.19■□□□□ 0.18
SDC4-201ENST00000372733 SYCE1LA8MT33 242 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 G3V2T6 193 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 STX16O14662 325 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 RAMP2O60895 175 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 MLYCDO95822 493 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 G6PDP11413 515 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 GGT1P19440 569 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 HALP42357 657 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 ZNF235Q14590 738 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 TRIM16LQ309B1 348 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 C6orf141Q5SZD1 244 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 FBXL22Q6P050 247 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 LETMD1Q6P1Q0 360 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 CRTC3Q6UUV7 619 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 PLEKHH3Q7Z736 793 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
SDC4-201ENST00000372733 MAGED4Q96JG8 741 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 COMMD8Q9NX08 183 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 ABI2Q9NYB9 513 aaPredicted RBP16.18■□□□□ 0.18
SDC4-201ENST00000372733 PDE10AQ9Y233 779 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 B3GNT3Q9Y2A9 372 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 POLR3HQ9Y535 204 aaPredicted RBP16.18■□□□□ 0.18
SDC4-201ENST00000372733 DOCK4Q8N1I0 1966 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 DFNA5O60443 496 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 NIPSNAP2O75323 286 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 SOAT2O75908 522 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 TBX18O95935 607 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 HMBSP08397 361 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 JAK1P23458 1154 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 ERVPABLB-1P60509 514 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 CD47Q08722 323 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 PTPRNQ16849 979 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 SULT1C3Q6IMI6 304 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 TAMM41Q96BW9 452 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 SDCCAG3Q96C92 435 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 MYEOVQ96EZ4 313 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 C17orf80Q9BSJ5 609 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 DAPK2Q9UIK4 370 aa16.18■□□□□ 0.18
SDC4-201ENST00000372733 FNDC3AQ9Y2H6 1198 aaKnown RBP16.18■□□□□ 0.18
SDC4-201ENST00000372733 MAN1A2O60476 641 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 NDUFS3O75489 264 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 RAD23AP54725 363 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 IL10RBQ08334 325 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 KCNAB2Q13303 367 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 PERM1Q5SV97 790 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 LAIR2Q6ISS4 152 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 MIB1Q86YT6 1006 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 SNX29P2Q8IUI4 249 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 ABI1Q8IZP0 508 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 CCDC138Q96M89 665 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms