RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SLC25A41Q8N5S1 370 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 DDHD1Q8NEL9 900 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 OXNAD1Q96HP4 312 aaPredicted RBP15.7■□□□□ 0.1
CKS1B-202ENST00000368436 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 TTC25Q96NG3 672 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 VAT1Q99536 393 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 ZCCHC2Q9C0B9 1178 aaKnown RBP15.7■□□□□ 0.1
CKS1B-202ENST00000368436 UGT1A7Q9HAW7 530 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 UGT1A10Q9HAW8 530 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 UGT1A8Q9HAW9 530 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 ALG6Q9Y672 507 aa15.7■□□□□ 0.1
CKS1B-202ENST00000368436 GLYATL1P3A0A0U1RQE8 302 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 GAPDHSO14556 408 aaPredicted RBP15.69■□□□□ 0.1
CKS1B-202ENST00000368436 RECKO95980 971 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 HLA-DPA1P20036 260 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 CTSCP53634 463 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 FOXK1P85037 733 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 MPP3Q13368 585 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 SEPT6Q14141 434 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 LLGL1Q15334 1064 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 TFDP3Q5H9I0 405 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 KAZNQ674X7 775 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 IRGCQ6NXR0 463 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 CYB5D1Q6P9G0 228 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 FAM151BQ6UXP7 276 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 FAM83HQ6ZRV2 1179 aaPredicted RBP15.69■□□□□ 0.1
CKS1B-202ENST00000368436 PID1Q7Z2X4 250 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 ZC3H18Q86VM9 953 aaKnown RBP15.69■□□□□ 0.1
CKS1B-202ENST00000368436 PPP1R3BQ86XI6 285 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 GPR150Q8NGU9 434 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 UBXN4Q92575 508 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 P3H4Q92791 437 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 RNF31Q96EP0 1072 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 STAMBPL1Q96FJ0 436 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 ELMO2Q96JJ3 720 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 FCRL4Q96PJ5 515 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 KLHL8Q9P2G9 620 aaPredicted RBP15.69■□□□□ 0.1
CKS1B-202ENST00000368436 PCDHB3Q9Y5E6 796 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 PCDHGA6Q9Y5G7 932 aa15.69■□□□□ 0.1
CKS1B-202ENST00000368436 hCG_1818297A0A087WSY0 165 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 IGHV5-51A0A0C4DH38 117 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 GPR39O43194 453 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 MT-ND3P03897 115 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 FURINP09958 794 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 CCNYL3P0C7X3 344 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PTMSP20962 102 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PPP1CAP62136 330 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 ITGA9Q13797 1035 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PPP2R5EQ16537 467 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 LACTB2Q53H82 288 aaPredicted RBP15.68■□□□□ 0.1
CKS1B-202ENST00000368436 GPRC6AQ5T6X5 926 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 METRNLQ641Q3 311 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 TMEM220Q6QAJ8 160 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 GLT6D1Q7Z4J2 308 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 BPHLQ86WA6 291 aaPredicted RBP15.68■□□□□ 0.1
CKS1B-202ENST00000368436 KATNAL2Q8IYT4 538 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 RCOR2Q8IZ40 523 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 IPMKQ8NFU5 416 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 BLOC1S5Q8TDH9 187 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 QKIQ96PU8 341 aaKnown RBP eCLIP15.68■□□□□ 0.12e-10■■■■■ 36
CKS1B-202ENST00000368436 SMOXQ9NWM0 555 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 KCND3Q9UK17 655 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 TRHDEQ9UKU6 1024 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PADI1Q9ULC6 663 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PKP3Q9Y446 797 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 PTPN13Q12923 2485 aa15.68■□□□□ 0.1
CKS1B-202ENST00000368436 HACD1B0YJ81 288 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 BUD23O43709 281 aaKnown RBP15.67■□□□□ 0.1
CKS1B-202ENST00000368436 ZRANB2O95218 330 aaKnown RBP eCLIP15.67■□□□□ 0.1
CKS1B-202ENST00000368436 TIAF1O95411 115 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 TBX2Q13207 712 aaPredicted RBP15.67■□□□□ 0.1
CKS1B-202ENST00000368436 ERV3-1Q14264 604 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 NFE2L1Q14494 772 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 KLHL35Q6PF15 583 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 KMT5CQ86Y97 462 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 ZFPM2Q8WW38 1151 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 ZNF514Q96K75 400 aaPredicted RBP15.67■□□□□ 0.1
CKS1B-202ENST00000368436 GOLPH3Q9H4A6 298 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 PDE7BQ9NP56 450 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 LHX9Q9NQ69 397 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 LNPEPQ9UIQ6 1025 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 PSMD13Q9UNM6 376 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 POLHQ9Y253 713 aa15.67■□□□□ 0.1
CKS1B-202ENST00000368436 FLNCQ14315 2725 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 OR2AG2A6NM03 316 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 F5H423 210 aaPredicted RBP15.66■□□□□ 0.1
CKS1B-202ENST00000368436 KATNA1O75449 491 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 CREG1O75629 220 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 MTHFD1P11586 935 aaKnown RBP15.66■□□□□ 0.1
CKS1B-202ENST00000368436 FOLR1P15328 257 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 MAGEA1P43355 309 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 SRSF1Q07955 248 aaKnown RBP eCLIP15.66■□□□□ 0.1
CKS1B-202ENST00000368436 XRCC4Q13426 336 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 DNASE1L3Q13609 305 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 PTPRCAPQ14761 206 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 IGFBP7Q16270 282 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 PWWP2BQ6NUJ5 590 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms