RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 HOXA13P31271 388 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HPCAL1P37235 193 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SEMA3BQ13214 749 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LARP4Q71RC2 724 aaKnown RBP eCLIP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SCML4Q8N228 414 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FBXO36Q8NEA4 188 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 POTEKPQ9BYX7 375 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ARHGEF4Q9NR80 690 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 BHMG1C9JSJ3 638 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ADGRD1Q6QNK2 874 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SH3RF1Q7Z6J0 888 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PIGMQ9H3S5 423 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GUCA1CO95843 209 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RPL10P27635 214 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DSTNP60981 165 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC7A9P82251 487 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GLO1Q04760 184 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 EN1Q05925 392 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DMRTA1Q5VZB9 504 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CCNYQ8ND76 341 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FRS2Q8WU20 508 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 P2RX7Q99572 595 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NUDT16L1Q9BRJ7 211 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GGA1Q9UJY5 639 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FAM149AA5PLN7 773 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GTF2IRD2BQ6EKJ0 949 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GTF2IRD2Q86UP8 949 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC25A41Q8N5S1 370 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR52L1Q8NGH7 329 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C12orf43Q96C57 262 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TIGARQ9NQ88 270 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PNMA8BQ9ULN7 279 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31D3P0C874 917 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RAB3AP20336 220 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC9A4Q6AI14 798 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31D4Q6ZUB0 917 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 WDR53Q7Z5U6 358 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RNF34Q969K3 372 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC35B4Q969S0 331 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLAMF9Q96A28 289 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZC3H10Q96K80 434 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 YIPF4Q9BSR8 244 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC27A6Q9Y2P4 619 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DENND3A2RUS2 1198 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DVL1O14640 695 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PGRMC2O15173 223 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DVL1P1P54792 670 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ARSFP54793 590 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FUT11Q495W5 492 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 AHSA2Q719I0 299 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HIST2H3AQ71DI3 136 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SSX8Q7RTT4 187 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FAM71AQ8IYT1 594 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LGI2Q8N0V4 545 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TEX19Q8NA77 164 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TASP1Q9H6P5 420 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 MRTO4Q9UKD2 239 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 COL5A2P05997 1499 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RAD51CO43502 376 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 VARS2Q5ST30 1063 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR7G3Q8NG95 312 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZDHHC12Q96GR4 267 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FEM1CQ96JP0 617 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DMGDHQ9UI17 866 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 MAP4K5Q9Y4K4 846 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ENTPD6O75354 484 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PSMG1O95456 288 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ADAM17P78536 824 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ACTBL2Q562R1 376 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DUPD1Q68J44 220 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L2Q6R6M4 530 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PAK1IP1Q9NWT1 392 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PREX2Q70Z35 1606 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FAM237BA0A1B0GVD1 139 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C9IYK1 514 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TSPAN8P19075 237 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPAM1P38567 509 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 B3GNTL1Q67FW5 361 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DENND1BQ6P3S1 775 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 USP51Q70EK9 711 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TOR3AQ9H497 397 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TUT1Q9H6E5 874 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM36Q9NQ86 728 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LIG4P49917 911 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC47A2Q86VL8 602 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 XYLT1Q86Y38 959 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FBXO8Q9NRD0 319 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CLN6Q9NWW5 311 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHGA11Q9Y5H2 935 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 IQGAP3Q86VI3 1631 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RASAL1O95294 804 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 AP2A1O95782 977 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ASGR1P07306 291 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PVALBP20472 110 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC26A5P58743 744 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C1QTNF12Q5T7M4 302 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ADNP2Q6IQ32 1131 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZC3H3Q8IXZ2 948 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms