RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PTCHD4Q6ZW05 846 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRMT11Q7Z4G4 463 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 C11orf96Q7Z7L8 435 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 DENND6AQ8IWF6 608 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZBTB2Q8N680 514 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 LRRC17Q8N6Y2 441 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 PLD4Q96BZ4 506 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 RPRD1BQ9NQG5 326 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 C1orf109Q9NX04 203 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 ANKDD1BA6NHY2 528 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 EI24O14681 340 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 C8GP07360 202 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 DHRS4L1P0CG22 281 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 TCF4P15884 667 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 ALDH3A2P51648 485 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 PPM1LQ5SGD2 360 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 PCED1BQ96HM7 432 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 IPPKQ9H8X2 491 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
CDC42BPA-202ENST00000366764 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 POLR2EP19388 210 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 GRIA2P42262 883 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 RFKQ969G6 155 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 A0A1B0GVM2 712 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TCAF2A6NFQ2 919 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 SKIV2LQ15477 1246 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 C10orf62Q5T681 223 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ARMC8Q8IUR7 673 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 OR52B2Q96RD2 323 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF624Q9P2J8 865 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ATP6V1HQ9UI12 483 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRIM17Q9Y577 477 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 CCNKO75909 580 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TCF3P15923 654 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 SOWAHAQ2M3V2 549 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ESRP1Q6NXG1 681 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPATA17Q96L03 361 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRAV19A0A0A6YYK7 116 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 LCHNA4D1U4 455 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 CYP4B1P13584 511 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ACOX1Q15067 660 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 FAM110CQ1W6H9 321 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 GCNT6Q5T4J0 391 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRPS1Q9UHF7 1281 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 NENFQ9UMX5 172 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 FBXW4P57775 412 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 GNA12Q03113 381 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 GALNT3Q14435 633 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ANKRD23Q86SG2 305 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PDGFDQ9GZP0 370 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PIGVQ9NUD9 493 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 MOCS1Q9NZB8 636 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 NTRK1P04629 796 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPAM1P38567 509 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TLDC1Q6P9B6 456 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PAOXQ6QHF9 649 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 A6NHS1 94 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT2B17O75795 530 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 FADS2O95864 444 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 IFNW1P05000 195 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 CDH4P55283 916 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 CAPN13Q6MZZ7 669 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 RERGLQ9H628 205 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 MAN2B2Q9Y2E5 1009 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 A8MT66 165 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TMEM198Q66K66 360 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 C11orf88Q6PI97 169 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 AHSA2Q719I0 299 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 PPCDCQ96CD2 204 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 FNDC11Q9BVV2 318 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF536O15090 1300 aa11.67□□□□□ -0.54
CDC42BPA-202ENST00000366764 STX16-NPEPL1H3BU86 382 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 STX16O14662 325 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CEP290O15078 2479 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 RPLP0P05388 317 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 LSM3P62310 102 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 NEK5Q6P3R8 708 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CYP20A1Q6UW02 462 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CANT1Q8WVQ1 401 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPATA2Q9UM82 520 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 GLYATL1P3A0A0U1RQE8 302 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 OR10H3O60404 316 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 HPRP00739 348 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TAC4Q86UU9 113 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRIM74Q86UV6 250 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms