RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ARL3P36405 182 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 CAMPP49913 170 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 MMP15P51511 669 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 LRMPQ12912 555 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 PRKAA1Q13131 559 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 DLG2Q15700 870 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 DUOXA1Q1HG43 343 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 JADE1Q6IE81 842 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 FAM180BQ6P0A1 224 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 PACS1Q6VY07 963 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 MAATS1Q7Z4T9 603 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 CNBD1Q8NA66 436 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 TRPC4APQ8TEL6 797 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF473Q8WTR7 871 aaKnown RBP4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 NUDCD1Q96RS6 583 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 DDOQ99489 341 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 RCC2Q9P258 522 aaKnown RBP4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 FBXL17Q9UF56 701 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMEM184BQ9Y519 407 aaPredicted RBP4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 FLT1P17948 1338 aa4.2□□□□□ -1.74
RNU4-28P-201ENST00000364739 A0A087X0M5 115 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 A0A1B0GX30 115 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMEM8BA6NDV4 472 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 PGPEP1LA6NFU8 196 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 BLOC1S5-TXNDC5H3BN57 136 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 EDIL3O43854 480 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 HS6ST1O60243 411 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 PDE9AO76083 593 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 TPPPO94811 219 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 INHBAP08476 426 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 ERVK-10P10266 1014 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 GABRB1P18505 474 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 CBLP22681 906 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 EPHA2P29317 976 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 CHRNB4P30926 498 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 HADHAP40939 763 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 CDH8P55286 799 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 MAMLD1Q13495 774 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 MVPQ14764 893 aaKnown RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMEM30BQ3MIR4 351 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZC2HC1CQ53FD0 456 aaPredicted RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 FAAH2Q6GMR7 532 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 FAM53AQ6NSI3 398 aaPredicted RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 FBXL22Q6P050 247 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 CHST9Q7L1S5 443 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 GALNT13Q8IUC8 556 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF843Q8N446 348 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 TRIM58Q8NG06 486 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 POMGNT1Q8WZA1 660 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 HDAC2Q92769 488 aaKnown RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 NCAPGQ9BPX3 1015 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 APOBEC3GQ9HC16 384 aaKnown RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 TRMT1Q9NXH9 659 aaKnown RBP4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 NENFQ9UMX5 172 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 CMAHPQ9Y471 501 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 SESN1Q9Y6P5 492 aa4.19□□□□□ -1.74
RNU4-28P-201ENST00000364739 PI4KAP2A4QPH2 592 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 A8MZ25 164 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 H0YIN7 160 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 BUD23O43709 281 aaKnown RBP4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 LDLRP01130 860 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 SRPRAP08240 638 aaKnown RBP4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 PRSS56P0CW18 603 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 CDH2P19022 906 aaPredicted RBP4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 GNAZP19086 355 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 NMBRP28336 390 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 MAP2K2P36507 400 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 DDX10Q13206 875 aaKnown RBP4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 SARM1Q6SZW1 724 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 TPRG1Q6ZUI0 275 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 TBC1D1Q86TI0 1168 aaPredicted RBP4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 CERS3Q8IU89 383 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 TEX11Q8IYF3 940 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 CRYBG2Q8N1P7 616 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 SCFD2Q8WU76 684 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 HGH1Q9BTY7 390 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 DNAJC18Q9H819 358 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 OGFRQ9NZT2 677 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 ACAD8Q9UKU7 415 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 PNMA2Q9UL42 364 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 KCNK7Q9Y2U2 307 aa4.18□□□□□ -1.74
RNU4-28P-201ENST00000364739 PCDH7O60245 1069 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 CKMT2P17540 419 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 GARSP41250 739 aaKnown RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 DCAF7P61962 342 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 GNB1P62873 340 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 PRAMEP78395 509 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 PCGF3Q3KNV8 242 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 ASPRV1Q53RT3 343 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 RARS2Q5T160 578 aaKnown RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZDHHC20Q5W0Z9 365 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 ALS2CLQ60I27 953 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 RSRC2Q7L4I2 434 aaKnown RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 SCYL3Q8IZE3 742 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 TTC39CQ8N584 583 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 LGALS12Q96DT0 336 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 ZNF582Q96NG8 517 aaPredicted RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 RBM4Q9BWF3 364 aaKnown RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 SLA2Q9H6Q3 261 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms