RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ITGA9Q13797 1035 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 ERV3-1Q14264 604 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 LLGL1Q15334 1064 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 TFDP3Q5H9I0 405 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 SIRPB2Q5JXA9 342 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 SPOCD1Q6ZMY3 1216 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 PID1Q7Z2X4 250 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 C11orf96Q7Z7L8 435 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 ZC3H18Q86VM9 953 aaKnown RBP8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 CCDC50Q8IVM0 306 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 VSTM4Q8IW00 320 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 TTC30BQ8N4P2 665 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 SIDT2Q8NBJ9 832 aaKnown RBP8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 IPMKQ8NFU5 416 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 KLHL6Q8WZ60 621 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 UBXN4Q92575 508 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 HAUS1Q96CS2 278 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 VAT1Q99536 393 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 CHP1Q99653 195 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 TWSG1Q9GZX9 223 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 IMP3Q9NV31 184 aaKnown RBP8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 EPHA6Q9UF33 1036 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 RSPH14Q9UHP6 348 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 TMPRSS11EQ9UL52 423 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 PADI1Q9ULC6 663 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 INTUQ9ULD6 942 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 POLHQ9Y253 713 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 TP53TG5Q9Y2B4 290 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 WDR37Q9Y2I8 494 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 KCNMB2Q9Y691 235 aa8.02□□□□□ -1.13
RNU4-59P-201ENST00000364447 PIPSLA2A3N6 862 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CDC14CA4D256 554 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 STX7O15400 261 aaKnown RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 GPR39O43194 453 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 BUD23O43709 281 aaKnown RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A9O60656 530 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 SPAG6O75602 509 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CREG1O75629 220 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RFPL1O75677 317 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 POP7O75817 140 aaKnown RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 ZRANB2O95218 330 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 EPOP01588 193 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A6P19224 532 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 MSH3P20585 1137 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A1P22309 533 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A4P22310 534 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 F8A1P23610 371 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CD68P34810 354 aaPredicted RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 FOXK1P85037 733 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DMPKQ09013 629 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 KLRB1Q12918 225 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 MPP3Q13368 585 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DNASE1L3Q13609 305 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 NFE2L1Q14494 772 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 KCNAB1Q14722 419 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 SLC1A5Q15758 541 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CHRNA6Q15825 494 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RPE65Q16518 533 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 LONRF2Q1L5Z9 754 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 FNBP1LQ5T0N5 605 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 GPRC6AQ5T6X5 926 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CCDC181Q5TID7 509 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 ARMC6Q6NXE6 501 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 TMEM220Q6QAJ8 160 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 KDELC1Q6UW63 502 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 CNGA4Q8IV77 575 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 ZNF567Q8N184 647 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RASGEF1AQ8N9B8 481 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DDHD1Q8NEL9 900 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 GPR150Q8NGU9 434 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DTX3LQ8TDB6 740 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 OXNAD1Q96HP4 312 aaPredicted RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RBM41Q96IZ5 413 aaKnown RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 SLC41A2Q96JW4 573 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 ZNF514Q96K75 400 aaPredicted RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 MRGPRX2Q96LB1 330 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 QKIQ96PU8 341 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 FCRL5Q96RD9 977 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 FERMT1Q9BQL6 677 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RAB33BQ9H082 229 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A7Q9HAW7 530 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A10Q9HAW8 530 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 UGT1A8Q9HAW9 530 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 IL17CQ9P0M4 197 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 FAM8A1Q9UBU6 413 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 TRHDEQ9UKU6 1024 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 RARRES3Q9UL19 164 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 MAN2B2Q9Y2E5 1009 aa8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DNMT3AQ9Y6K1 912 aaPredicted RBP8.01□□□□□ -1.13
RNU4-59P-201ENST00000364447 DOPEY2Q9Y3R5 2298 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 hCG_1818297A0A087WSY0 165 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 IGHV5-51A0A0C4DH38 117 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 UBA6A0AVT1 1052 aaPredicted RBP8□□□□□ -1.13
RNU4-59P-201ENST00000364447 MACROD2A1Z1Q3 448 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 KLHL33A6NCF5 533 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 GOLGA6L3A6NEY3 463 aa8□□□□□ -1.13
RNU4-59P-201ENST00000364447 TLCD2A6NGC4 264 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms