RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 ITPAQ9BY32 194 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 FAM95CA0A1B0GW59 222 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 C9JVG2 144 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 ITGAMP11215 1152 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 PSKH1P11801 424 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 RFX2P48378 723 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 TKTL1P51854 596 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 CDH8P55286 799 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 EMX2Q04743 252 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 RAPSNQ13702 412 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 AAK1Q2M2I8 961 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 EID3Q8N140 333 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 TMEM74Q96NL1 305 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 GLTPQ9NZD2 209 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
SPTSSB-201ENST00000359175 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 EEDO75530 441 aaKnown RBP13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 NMBRP28336 390 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 FMO3P31513 532 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 HNF4AP41235 474 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 TCP10Q12799 353 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 SURF1Q15526 300 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 LETMD1Q6P1Q0 360 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 PID1Q7Z2X4 250 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 SLC22A9Q8IVM8 553 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 TCTE3Q8IZS6 198 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 GLB1L3Q8NCI6 653 aaPredicted RBP13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 KHSRPQ92945 711 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 GIMAP5Q96F15 307 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 MASTLQ96GX5 879 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 LRRC3Q9BY71 257 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 IL20Q9NYY1 176 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 PCDHB14Q9Y5E9 798 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 LY75O60449 1722 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 MFSD11O43934 449 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 HS6ST1O60243 411 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 PDGFAP04085 211 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 HOXD8P13378 290 aaPredicted RBP13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 EFR3AQ14156 821 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 ANKRD34AQ69YU3 496 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 CNTN4Q8IWV2 1026 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 HS3ST5Q8IZT8 346 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 PYCR2Q96C36 320 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 C14orf119Q9NWQ9 140 aa13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
SPTSSB-201ENST00000359175 CILPO75339 1184 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 CST1P01037 141 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 ANXA6P08133 673 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 COL6A1P12109 1028 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 IFI30P13284 250 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 GNPDA1P46926 289 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 RCAN2Q14206 197 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 GRB7Q14451 532 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 PAGE3Q5JUK9 113 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 KCTD11Q693B1 232 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 BRINP3Q76B58 766 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 BLOC1S5Q8TDH9 187 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 FRS2Q8WU20 508 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 ISG20Q96AZ6 181 aaKnown RBP13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 COMMD8Q9NX08 183 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 FBXO10Q9UK96 956 aa13.15□□□□□ -0.31
SPTSSB-201ENST00000359175 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 NFIBO00712 420 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 FTH1P02794 183 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 CYP2A6P11509 494 aaPredicted RBP13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 GOT1P17174 413 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 CBX5P45973 191 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 METTL2BQ6P1Q9 378 aaKnown RBP13.14□□□□□ -0.31
SPTSSB-201ENST00000359175 AMIGO1Q86WK6 493 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms