RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 BCL9O00512 1426 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 FOXO6A8MYZ6 492 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 TRAFD1O14545 582 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 MAPK12P53778 367 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 MTTPP55157 894 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 DDR1Q08345 913 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 LCN1P1Q5VSP4 162 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 MTRRQ9UBK8 725 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 ASMTP46597 345 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 XIAPP98170 497 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 ZFP69Q49AA0 526 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 FAM129BQ96TA1 746 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 LHX5Q9H2C1 402 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 R3HDM2Q9Y2K5 976 aaKnown RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 GSC2O15499 205 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 C2P06681 752 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 SLURP2P0DP57 97 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 OR2L3Q8NG85 312 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 ALG2Q9H553 416 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 TRNAU1APQ9NX07 287 aaKnown RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 E7ENX8 843 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 CCNKO75909 580 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 DRG2P55039 364 aaKnown RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 MINDY4Q4G0A6 757 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 ING5Q8WYH8 240 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 HMCESQ96FZ2 354 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 CPXM1Q96SM3 734 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 SNX10Q9Y5X0 201 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 LRRC10BA6NIK2 292 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PRMT5O14744 637 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CDK14O94921 469 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PGRP06401 933 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 TPSB2P20231 275 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 TPSAB1Q15661 275 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 STRADAQ7RTN6 431 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ANKRD46Q86W74 232 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 STYXQ8WUJ0 223 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CST11Q9H112 138 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 HIPK3Q9H422 1215 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ATXN10Q9UBB4 475 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ZNF208O43345 1280 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PRAMEF1O95521 474 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 HOXC12P31275 282 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 GPD2P43304 727 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CLCQ05315 142 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ARL10Q8N8L6 244 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 TTC29Q8NA56 475 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PIGXQ8TBF5 258 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ZNF570Q96NI8 536 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CERS4Q9HA82 394 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 MGAT4AQ9UM21 535 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 GOT2P00505 430 aaKnown RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 EFNA1P20827 205 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 DDX6P26196 483 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 RPIAP49247 311 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 RAB43Q86YS6 212 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CRYBG2Q8N1P7 616 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 LPGAT1Q92604 370 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 DEFB118Q96PH6 123 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 MED31Q9Y3C7 131 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 TESMINQ9Y4I5 508 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PLK4O00444 970 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 GALK1P51570 392 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 ZNF460Q14592 562 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 UBAP2Q5T6F2 1119 aaKnown RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 PAOXQ6QHF9 649 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 HM13Q8TCT9 377 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 LRTOMTQ8WZ04 291 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 TAPBPLQ9BX59 468 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CCNB2O95067 398 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 RABGGTBP53611 331 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CDH12P55289 794 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 RFTN2Q52LD8 501 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-202ENST00000359082 UBE2J2Q8N2K1 259 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 GAL3ST1Q99999 423 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 CHCHD6Q9BRQ6 235 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 MIOSQ9NXC5 875 aa18.19■□□□□ 0.5
SHANK1-202ENST00000359082 IFNW1P05000 195 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 PPP3R1P63098 170 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 ELP6Q0PNE2 266 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 EGFLAMQ63HQ2 1017 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 SATL1Q86VE3 508 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 MED28Q9H204 178 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 DPEP3Q9H4B8 488 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 CCDC177Q9NQR7 707 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-202ENST00000359082 PER2O15055 1255 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 RYKP34925 604 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 INHBEP58166 350 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 TSPAN18Q96SJ8 248 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 NMUR2Q9GZQ4 415 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 DLG1Q12959 904 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 ADGRG6Q86SQ4 1221 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 ZNF615Q8N8J6 731 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 ATAD1Q8NBU5 361 aa18.18■□□□□ 0.5
SHANK1-202ENST00000359082 TRMOQ9BU70 441 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms