RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SH3GL3Q99963 347 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF334Q9HCZ1 680 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-201ENST00000347613 SLC25A37Q9NYZ2 338 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 VAPAQ9P0L0 249 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 NDUFAF1Q9Y375 327 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 PCDHB9Q9Y5E1 797 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 A0A1W2PQ67 120 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 F5H5T6 163 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 FFAR3O14843 346 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 LSM1O15116 133 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 GPR42O15529 346 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 FZD6O60353 706 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 DFNA5O60443 496 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ATE1O95260 518 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 MATN4O95460 622 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CLDN7O95471 211 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 H6PDO95479 791 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 PENKP01210 267 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 GJA1P17302 382 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CST5P28325 142 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SHMT2P34897 504 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CCL23P55773 120 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 NFE2Q16621 373 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SLC36A3Q495N2 470 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SUSD1Q6UWL2 747 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 HACD2Q6Y1H2 254 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 PHACTR4Q8IZ21 702 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 LMNTD1Q8N9Z9 388 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CLHC1Q8NHS4 586 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 AURKBQ96GD4 344 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ANKRD60Q9BZ19 345 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 EPB41L1Q9H4G0 881 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ALG2Q9H553 416 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 PLSCR2Q9NRY7 297 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 UBA2Q9UBT2 640 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CNOT11Q9UKZ1 510 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 HELZP42694 1942 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 A0A1W2PP18 115 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 DHRS12A0PJE2 317 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CCDC160A6NGH7 325 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TNFAIP8O95379 198 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ESRRBO95718 433 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 EPOP01588 193 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ALDH2P05091 517 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 HSD17B1P14061 328 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 LBPP18428 481 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 PSMA3P25788 255 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SLC26A3P40879 764 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 HSPA7P48741 367 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 MLLT10P55197 1068 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 FCGRTP55899 365 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ATP6V0D1P61421 351 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 HTRA3P83110 453 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 RING1Q06587 406 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 BIRC2Q13490 618 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TAF1AQ15573 450 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ATP6AP1Q15904 470 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CYP51A1Q16850 503 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SAMD4BQ5PRF9 694 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 EGFLAMQ63HQ2 1017 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TXNDC8Q6A555 127 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 LAIR1Q6GTX8 287 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 MRNIPQ6NTE8 343 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 NCEH1Q6PIU2 408 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 GOLGA7Q7Z5G4 137 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM126BQ8IUX1 230 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 RIMKLAQ8IXN7 391 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SLC43A3Q8NBI5 491 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 STAG3L4Q8TBR4 150 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CD99L2Q8TCZ2 262 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 PIH1D2Q8WWB5 315 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ITFG2Q969R8 447 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CCDC126Q96EE4 140 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SPATA17Q96L03 361 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 CINPQ9BW66 212 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 MRPS26Q9BYN8 205 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TNKS2Q9H2K2 1166 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 SCUBE2Q9NQ36 999 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 EXD2Q9NVH0 621 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 IL17CQ9P0M4 197 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TMPRSS11EQ9UL52 423 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 INVSQ9Y283 1065 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 COMMD3-BMI1R4GMX3 469 aa5.96□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF106Q9H2Y7 1883 aaKnown RBP5.96□□□□□ -1.46
CLCN3-201ENST00000347613 TBKBP1A7MCY6 615 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 SYN3O14994 580 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 PKMP14618 531 aaKnown RBP5.95□□□□□ -1.46
CLCN3-201ENST00000347613 ATP5C1P36542 298 aaKnown RBP5.95□□□□□ -1.46
CLCN3-201ENST00000347613 MAPKAPK2P49137 400 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 ATP4BP51164 291 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 YBEYP58557 167 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-201ENST00000347613 B4GALNT1Q00973 533 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 TRAF3Q13114 568 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 PLD1Q13393 1074 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 RBBP7Q16576 425 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 LCN8Q6JVE9 175 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 LRRC8DQ7L1W4 858 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 GALNT10Q86SR1 603 aa5.95□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM199Q8N511 208 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms