RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TYK2P29597 1187 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 PBLDP30039 288 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 RAB10P61026 200 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNF658BQ4V348 819 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 WDR45BQ5MNZ6 344 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 LYSMD4Q5XG99 296 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 PAQR3Q6TCH7 311 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 C11orf74Q86VG3 221 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 SPATS2Q86XZ4 545 aaKnown RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 TRAPPC5Q8IUR0 188 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 LILRA3Q8N6C8 439 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 MFSD2AQ8NA29 543 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 OR56A4Q8NGH8 313 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 CD200R1Q8TD46 325 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 ANKRD49Q8WVL7 239 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 KCNJ9Q92806 393 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 TSACCQ96A04 125 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 ZC3H10Q96K80 434 aaKnown RBP18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 TMEM74BQ9NUR3 256 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 MOSPD1Q9UJG1 213 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 SUFUQ9UMX1 484 aa18.7■□□□□ 0.58
CHMP4A-201ENST00000347519 A0A096LPK6 155 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 H3BMM5 538 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 TOR1BO14657 336 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 GRID2O43424 1007 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 VPS26AO75436 327 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 POP7O75817 140 aaKnown RBP18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 CD9P21926 228 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 CNR2P34972 360 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 CCNFP41002 786 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 THOP1P52888 689 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 SLC12A2P55011 1212 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 DLG1Q12959 904 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 EIF2B5Q13144 721 aaKnown RBP18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 FZD2Q14332 565 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 ALG11Q2TAA5 492 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 ATP6V1G3Q96LB4 118 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 CCM2Q9BSQ5 444 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 VPS11Q9H270 941 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 CYP4F12Q9HCS2 524 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 PCMTD2Q9NV79 361 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 TAS2R13Q9NYV9 303 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 FAM8A1Q9UBU6 413 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNHIT2Q9UHR6 403 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 KLF15Q9UIH9 416 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 DHRS7Q9Y394 339 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 PCDHGA2Q9Y5H1 932 aa18.69■□□□□ 0.58
CHMP4A-201ENST00000347519 PRSS38A1L453 326 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 E5RI56 91 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 BCAT2O15382 392 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 AOAHP28039 575 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 GNPDA1P46926 289 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CSNK1EP49674 416 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 MAGOHP61326 146 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SLC18A2Q05940 514 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ILF2Q12905 390 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SIM2Q14190 667 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PYCR3Q53H96 274 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNF542PQ5EBM4 170 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ACSBG2Q5FVE4 666 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 FAM83HQ6ZRV2 1179 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 LRRTM4Q86VH4 590 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CPNE9Q8IYJ1 553 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PLD6Q8N2A8 252 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SPATA6LQ8N4H0 392 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TSPAN17Q96FV3 270 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TCEAL2Q9H3H9 227 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 LATS2Q9NRM7 1088 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNF358Q9NW07 568 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TRMT6Q9UJA5 497 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 GPR34Q9UPC5 381 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ST14Q9Y5Y6 855 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 R4GN57 208 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 USP34Q70CQ2 3546 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TDRD6O60522 2096 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SPTY2D1-AS1A0A0U1RR47 76 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TLR4O00206 839 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SPAG7O75391 227 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 FTH1P02794 183 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 KRT4P19013 534 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 HTR1BP28222 390 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CRABP2P29373 138 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 SRP54P61011 504 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PPARDQ03181 441 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PDAP1Q13442 181 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 LPAL2Q16609 132 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 RD3Q7Z3Z2 195 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 VRK3Q8IV63 474 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CENPLQ8N0S6 344 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ZBTB2Q8N680 514 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ELMO1Q92556 727 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 INPP5DQ92835 1189 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 LINC00615Q96LM1 132 aaPredicted RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PANX3Q96QZ0 392 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 UNKQ9C0B0 810 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CARS2Q9HA77 564 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 GPAMQ9HCL2 828 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms