RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.236e-18■■□□□ 13
TRA2B-202ENST00000342294 TRIM10Q9UDY6 481 aa16.51■□□□□ 0.23
TRA2B-202ENST00000342294 COPG1Q9Y678 874 aaKnown RBP16.51■□□□□ 0.23
TRA2B-202ENST00000342294 PDZD2O15018 2839 aa16.51■□□□□ 0.23
TRA2B-202ENST00000342294 CROCCQ5TZA2 2017 aa16.51■□□□□ 0.23
TRA2B-202ENST00000342294 MTX2O75431 263 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 CDK14O94921 469 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 MMP2P08253 660 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 FERP16591 822 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ARL4DP49703 201 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ZNF165P49910 485 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
TRA2B-202ENST00000342294 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ALS2CLQ60I27 953 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 SP5Q6BEB4 398 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-202ENST00000342294 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ENOX1Q8TC92 643 aaKnown RBP16.5■□□□□ 0.23
TRA2B-202ENST00000342294 UBE2Q2Q8WVN8 375 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 ZFYVE1Q9HBF4 777 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 TMPRSS11EQ9UL52 423 aa16.5■□□□□ 0.23
TRA2B-202ENST00000342294 UBA6A0AVT1 1052 aaPredicted RBP16.49■□□□□ 0.23
TRA2B-202ENST00000342294 HLA-DQB2P05538 268 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 NAA30Q147X3 362 aaPredicted RBP16.49■□□□□ 0.23
TRA2B-202ENST00000342294 ZRSR2Q15696 482 aaKnown RBP16.49■□□□□ 0.23
TRA2B-202ENST00000342294 TMC3Q7Z5M5 1100 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 TEKT4Q8WW24 435 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 CPT1BQ92523 772 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 TSGA13Q96PP4 275 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 BTRCQ9Y297 605 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 PCDHGA10Q9Y5H3 936 aa16.49■□□□□ 0.23
TRA2B-202ENST00000342294 DIDO1Q9BTC0 2240 aaKnown RBP16.49■□□□□ 0.23
TRA2B-202ENST00000342294 OR5K3A6NET4 321 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 MFSD11O43934 449 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-202ENST00000342294 TPM2P07951 284 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 CCDC172P0C7W6 258 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 CCNCP24863 283 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 CA5AP35218 305 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 HALP42357 657 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 ABRQ12979 859 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 RPE65Q16518 533 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 TIGD7Q6NT04 549 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-202ENST00000342294 Q6ZS92 163 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 MCEMP1Q8IX19 187 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 CARFQ8N187 725 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 FAM71BQ8TC56 605 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 ERGIC2Q96RQ1 377 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 ILKAPQ9H0C8 392 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-202ENST00000342294 ZNF552Q9H707 407 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-202ENST00000342294 RAD18Q9NS91 495 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 PCMTD2Q9NV79 361 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 TTLL3Q9Y4R7 772 aa16.48■□□□□ 0.23
TRA2B-202ENST00000342294 SETD2Q9BYW2 2564 aaPredicted RBP16.47■□□□□ 0.23
TRA2B-202ENST00000342294 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 F5H423 210 aaPredicted RBP16.47■□□□□ 0.23
TRA2B-202ENST00000342294 LRRTM2O43300 516 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 KCNJ13O60928 360 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 FTLP02792 175 aaPredicted RBP16.47■□□□□ 0.23
TRA2B-202ENST00000342294 VCLP18206 1134 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 PER3P56645 1201 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 DMPKQ09013 629 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 MYBPC3Q14896 1274 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 PAFAH1B3Q15102 231 aaKnown RBP16.47■□□□□ 0.23
TRA2B-202ENST00000342294 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 TMTC4Q5T4D3 741 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 LYPLAL1Q5VWZ2 237 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 CUZD1Q86UP6 607 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 VPS35Q96QK1 796 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 TRIB3Q96RU7 358 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 ADGRE3Q9BY15 652 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 HRASLS2Q9NWW9 162 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 SHOC2Q9UQ13 582 aa16.47■□□□□ 0.23
TRA2B-202ENST00000342294 ADGRG4Q8IZF6 3080 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 GZMAP12544 262 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 BPIP17213 487 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 CD86P42081 329 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 SLC25A11Q02978 314 aaKnown RBP16.46■□□□□ 0.23
TRA2B-202ENST00000342294 TMEM115Q12893 351 aaPredicted RBP16.46■□□□□ 0.23
TRA2B-202ENST00000342294 GALNT3Q14435 633 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 NCF4Q15080 339 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 IFI16Q16666 785 aaKnown RBP16.46■□□□□ 0.23
TRA2B-202ENST00000342294 KYNUQ16719 465 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 NCBP2-AS2Q69YL0 99 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 SPOCD1Q6ZMY3 1216 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 MRGPREQ86SM8 312 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 KCNMB4Q86W47 210 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 RAB43Q86YS6 212 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 TRAPPC5Q8IUR0 188 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 SYTL1Q8IYJ3 562 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 ZNF653Q96CK0 615 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 CLIP3Q96DZ5 547 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 PPM1MQ96MI6 270 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 MAGEE1Q9HCI5 957 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 HAUS2Q9NVX0 235 aa16.46■□□□□ 0.23
TRA2B-202ENST00000342294 SCINQ9Y6U3 715 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms