RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 HDAC10Q969S8 669 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CBY1Q9Y3M2 126 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 A0A087X0B3 334 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 IQCF5A8MTL0 148 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 H6PDO95479 791 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SUPT20HL2P0C7V6 817 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 NADK2Q4G0N4 442 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 UBR7Q8N806 425 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 HSPA12BQ96MM6 686 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 GAD1Q99259 594 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 WACQ9BTA9 647 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 EBPLQ9BY08 206 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 FBXO44Q9H4M3 255 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TM9SF3Q9HD45 589 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 INMTO95050 263 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CDKN2CP42773 168 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 VTCN1Q7Z7D3 282 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TMPRSS11BQ86T26 416 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PIWIL1Q96J94 861 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 BRINP2Q9C0B6 783 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TXNL1O43396 289 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PAPSS2O95340 614 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CYP3A4P08684 503 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 IGFALSP35858 605 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CDH12P55289 794 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 LRRC37A5PQ49AS3 106 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KCNN2Q9H2S1 579 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ANKRA2Q9H9E1 313 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 OR12D3Q9UGF7 316 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PDPK1O15530 556 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 GOT1P17174 413 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ITPKAP23677 461 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TTPAP49638 278 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 C9orf64Q5T6V5 341 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 GSKIPQ9P0R6 139 aa12.64□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KDM6BO15054 1643 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 FBP2O00757 339 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CHRNA5P30532 468 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 MATKP42679 507 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 POLR2LP62875 67 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 HSDL1Q3SXM5 330 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SPATA19Q7Z5L4 167 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 C11orf65Q8NCR3 313 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 RAB2BQ8WUD1 216 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KLHL33A6NCF5 533 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 BPGMP07738 259 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ILF2Q12905 390 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KCTD9Q7L273 389 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ACBD4Q8NC06 268 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 HBEGFQ99075 208 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TBCCD1Q9NVR7 557 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ST14Q9Y5Y6 855 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 M0R233 179 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 WDR62O43379 1518 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 UROSP10746 265 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 USP6P35125 1406 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 AIMP2Q13155 320 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 AKR1C8PQ5T2L2 129 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 POGLUT1Q8NBL1 392 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PRMT8Q9NR22 394 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TISP43B9A030 160 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SGCEO43556 437 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TGM6O95932 706 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 RAB3BP20337 219 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CD79BP40259 229 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SGCDQ92629 289 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 MIPEPQ99797 713 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KCNE2Q9Y6J6 123 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PEX13Q92968 403 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 PLLPQ9Y342 182 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CATP04040 527 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ACTR3P61158 418 aa12.63□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ADGRE1Q14246 886 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms