RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ABCB7O75027 752 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 RPP40O75818 363 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 EIF2S1P05198 315 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ITPKAP23677 461 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ZNF132P52740 706 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 KCNAB2Q13303 367 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 GRB7Q14451 532 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 TYSND1Q2T9J0 566 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 TMPRSS11AQ6ZMR5 421 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SLC15A3Q8IY34 581 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 MUC13Q9H3R2 512 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 GDAP2Q9NXN4 497 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SNX6Q9UNH7 406 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 NOTOA8MTQ0 251 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 EPORP19235 508 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 KIR3DL1P43629 444 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 MFSD10Q14728 455 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SNX29P2Q8IUI4 249 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SCAMP5Q8TAC9 235 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 GTPBP3Q969Y2 492 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 HAPLN3Q96S86 360 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 CGREF1Q99674 301 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 NKIRAS2Q9NYR9 191 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SLC22A1O15245 554 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 MAGEA10P43363 369 aaPredicted RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 ENPEPQ07075 957 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 STK40Q8N2I9 435 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 LIX1Q8N485 282 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SIDT2Q8NBJ9 832 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 NSUN5Q96P11 429 aaKnown RBP13.89□□□□□ -0.19
EPHB3-201ENST00000330394 CNPPD1Q9BV87 410 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SLC25A51Q9H1U9 297 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 SNTG1Q9NSN8 517 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 AP3M1Q9Y2T2 418 aa13.89□□□□□ -0.19
EPHB3-201ENST00000330394 E9PAM4 449 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 DPYSL4O14531 572 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 SLC35E2BP0CK96 405 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CDH5P33151 784 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 C11orf88Q6PI97 169 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 OR8H1Q8NGG4 311 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ZNF420Q8TAQ5 688 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 DHRS4Q9BTZ2 278 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 BCO2Q9BYV7 579 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CLEC4AQ9UMR7 237 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CYP2A7P20853 494 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CPOXP36551 454 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ATP12AP54707 1039 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ITGA1P56199 1179 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 C16orf62Q7Z3J2 963 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 NELL1Q92832 810 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 MKS1Q9NXB0 559 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ADAM30Q9UKF2 790 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 LOC100130705A0A1B0GUX0 176 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ANKDD1BA6NHY2 528 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 SLC28A1O00337 649 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 EGFRP00533 1210 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CDH1P12830 882 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 GSTM5P46439 218 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 DOK6Q6PKX4 331 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 TMEM126BQ8IUX1 230 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 TMEM159Q96B96 161 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 HMCESQ96FZ2 354 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 HNRNPABQ99729 332 aaKnown RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CCM2LQ9NUG4 571 aaPredicted RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
EPHB3-201ENST00000330394 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
EPHB3-201ENST00000330394 CEPT1Q9Y6K0 416 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms