RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TAC1P20366 129 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 CSRP1P21291 193 aaKnown RBP16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 CD9P21926 228 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 LHCGRP22888 699 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 TTPAP49638 278 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 SEC24CP53992 1094 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 PRKAA2P54646 552 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 RAB10P61026 200 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC14A1Q13336 389 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 CTBP1Q13363 440 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 TYSND1Q2T9J0 566 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM45BPQ6NSW5 357 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 USP45Q70EL2 814 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 KANSL1Q7Z3B3 1105 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 NAXDQ8IW45 347 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 TTC30BQ8N4P2 665 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 PAF1Q8N7H5 531 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 GDAP1Q8TB36 358 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM45AQ8TCE6 357 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 ASB12Q8WXK4 309 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 SCRN2Q96FV2 425 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 TBATAQ96M53 351 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM111AQ96PZ2 611 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 GPR63Q9BZJ6 419 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 IL1RAPL1Q9NZN1 696 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 ACOT9Q9Y305 439 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 A0A096LPK6 155 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM95CA0A1B0GW59 222 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC189A1A4V9 331 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 CAPN8A6NHC0 703 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 NPIPB15A6NHN6 443 aaPredicted RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 TCP11X1B4DZS4 312 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 EBAG9O00559 213 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SDC3O75056 442 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 S1PR4O95977 384 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 TOP3BO95985 862 aaKnown RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 GOT2P00505 430 aaKnown RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 C2P06681 752 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 GABRB3P28472 473 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PMLP29590 882 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SERPINB4P48594 390 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SUOXP51687 545 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ADARP55265 1226 aaKnown RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PFN3P60673 137 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ELP6Q0PNE2 266 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 FZD2Q14332 565 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 IRF4Q15306 451 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ZKSCAN8Q15776 578 aaPredicted RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ZSCAN26Q16670 478 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ERAP2Q6P179 960 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 DPPA4Q7L190 304 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PTAR1Q7Z6K3 402 aaPredicted RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PIGWQ7Z7B1 504 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 CLEC14AQ86T13 490 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 DENND6AQ8IWF6 608 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 OTUD6BQ8N6M0 293 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 OR4K2Q8NGD2 314 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SAP25Q8TEE9 199 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF75CPQ92670 426 aaPredicted RBP16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PITPNM3Q9BZ71 974 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 MANSC1Q9H8J5 431 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 RAD18Q9NS91 495 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 UCKL1Q9NWZ5 548 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 IL17CQ9P0M4 197 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 PCOLCE2Q9UKZ9 415 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC39A10Q9ULF5 831 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF711Q9Y462 761 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 SPO11Q9Y5K1 396 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 MYLKQ15746 1914 aa16.25■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC162PA2VCL2 907 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 H2AFYO75367 372 aaKnown RBP16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 RECQL5O94762 991 aaPredicted RBP16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 NEFHP12036 1026 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 CEACAM1P13688 526 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 HNF1BP35680 557 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 RXRGP48443 463 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 ARSDP51689 593 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 STC1P52823 247 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 OVGP1Q12889 678 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 RAPH1Q70E73 1250 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 ERMP1Q7Z2K6 904 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 HSD11B1LQ7Z5J1 315 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 LRRC34Q8IZ02 419 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC25A45Q8N413 288 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 DTX3LQ8TDB6 740 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 SETD7Q8WTS6 366 aaKnown RBP16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 MCCC1Q96RQ3 725 aaPredicted RBP16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 CDH19Q9H159 772 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 ERVMER34-1Q9H9K5 563 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 ZFYVE1Q9HBF4 777 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC17A7Q9P2U7 560 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 VWA7Q9Y334 891 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 ACACBO00763 2458 aa16.24■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC78A2IDD5 438 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 GOLGA8TH3BQL2 631 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 K7ESM1 405 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 FPGTO14772 594 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 PCDHGA12O60330 932 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms