RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FAM92AA1XBS5 289 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 KDELR3O43731 214 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TSPAN12O95859 305 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 BMP1P13497 986 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 OR1D2P34982 312 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 RFC2P35250 354 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ALDH3B2P48448 385 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 HPCAP84074 193 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 CREB5Q02930 508 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 BFSP2Q13515 415 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 AP5B1Q2VPB7 878 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 INTS11Q5TA45 600 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 Q6ZSR9 355 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 CLEC4FQ8N1N0 589 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 HM13Q8TCT9 377 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 FIG4Q92562 907 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 SEPT8Q92599 483 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 WBP2Q969T9 261 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TBCDQ9BTW9 1192 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ZFP14Q9HCL3 533 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 GALNT8Q9NY28 637 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 PKP3Q9Y446 797 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TMX2-CTNND1H3BSU7 103 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 E2F3O00716 465 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 GMNNO75496 209 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 S100BP04271 92 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ACBD5Q5T8D3 534 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ANKS3Q6ZW76 656 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 THUMPD3Q9BV44 507 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 SLC52A3Q9NQ40 469 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 SMPD3Q9NY59 655 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 STX16O14662 325 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 COCHO43405 550 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 BNIP3LO60238 219 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 SELPP16109 830 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 RHOAP61586 193 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 PYCR3Q53H96 274 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 BORAQ6PGQ7 559 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TBPL2Q6SJ96 375 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 STK32CQ86UX6 486 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 OR4F6Q8NGB9 312 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 FBXO30Q8TB52 745 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM81AQ8TBF8 368 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 MTFMTQ96DP5 389 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 NUSAP1Q9BXS6 441 aaKnown RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 HMX1Q9NP08 348 aaPredicted RBP13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
ATP2C1-201ENST00000328560 ZFC3H1O60293 1989 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 ANKRD33BA6NCL7 494 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 B4GAT1O43505 415 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 CLDN11O75508 207 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 EEDO75530 441 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 FCGR1AP12314 374 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 RPL38P63173 70 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MTA1Q13330 715 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 DCTN2Q13561 401 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 LYSMD3Q7Z3D4 306 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MFSD2AQ8NA29 543 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 TNIP2Q8NFZ5 429 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 CLHC1Q8NHS4 586 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 TTPALQ9BTX7 342 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 IPPKQ9H8X2 491 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 KLHL33A6NCF5 533 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 GSTA4O15217 222 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 ACOX3O15254 700 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 RASAL1O95294 804 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 ALBP02768 609 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MYF6P23409 242 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 TNK2Q07912 1038 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 PABPC1LQ4VXU2 614 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 RFTN2Q52LD8 501 aaPredicted RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 CYP20A1Q6UW02 462 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 ABRAXAS1Q6UWZ7 409 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MILR1Q7Z6M3 343 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 ERI1Q8IV48 349 aaKnown RBP13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 TBC1D21Q8IYX1 336 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 BOCQ9BWV1 1114 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 CIPCQ9C0C6 399 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 SRRDQ9UH36 339 aa13.86□□□□□ -0.19
ATP2C1-201ENST00000328560 HOXA2O43364 376 aa13.85□□□□□ -0.19
ATP2C1-201ENST00000328560 GKP32189 559 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms